Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bipolaris_20oryzae_20[genbank_20GCA_5F001675385.1_202016-06-22] 1,640 sequences; 31,674,030 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq1112 87.8 2e-12 >seq1112 Length=120617 Score = 87.8 bits (96), Expect = 2e-12 Identities = 151/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 158449 TTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAA-CAACAGACAA 158507 |||||| | ||| |||| | ||| || || ||||| || |||||||| | || || || Sbjct 3313 TTTGGTGTGCCTCTGGGCTTCGGTGGACCACATGCCGCTTTCTTTGCCTGCGAC-GAGAA 3255 Query 158508 GTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGGTAATAA 158567 ||||||| | ||||| ||||| | | | |||| || ||||| || || | Sbjct 3254 GTATAAGCGTAAGATTCCTGGTCGCTTGATCGGTCTTTCCAAGGATAGGCTCGGCAACCA 3195 Query 158568 AGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCAACCAG 158627 ||| || | || || |||||| | |||||||| || | | || || ||||| || Sbjct 3194 GGCAGCACGACTTGCCCTGCAGACTCGTGAGCAGCACATTCGCCGCGAGAAGGCAACGAG 3135 Query 158628 TAACATCTGCACAGCACAAGCACTGCTGGCTAATATG 158664 ||||| ||||||||||| || || |||| |||||| Sbjct 3134 CAACATTTGCACAGCACAGGCTCTTTTGGCCAATATG 3098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588039144950400