Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bipolaris_20oryzae_20[genbank_20GCA_5F001675385.1_202016-06-22] 1,640 sequences; 31,674,030 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq1227 100 2e-15 seq193 96.9 3e-14 >seq1227 Length=91357 Score = 100 bits (110), Expect = 2e-15 Identities = 117/157 (75%), Gaps = 1/157 (1%) Strand=Plus/Minus Query 550381 TGGTCAAGAA-GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAAC 550439 ||| |||||| || | | | || || | ||||| || || || || || ||||| || | Sbjct 37468 TGGGCAAGAACGTCAAGAACGCTGTCGTCACTGTCCCCGCCTACTTCAACGACTCCCAGC 37409 Query 550440 GTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATG 550499 ||||||| || || |||||||| | || || || || |||||||| ||| | |||| | Sbjct 37408 GTCAAGCCACCAAGGATGCTGGTCAGATCGCCGGTCTCAATGTTCTCCGTGTCGTCAACG 37349 Query 550500 AACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 |||| ||||||||||| || || ||||| || || || Sbjct 37348 AACCCACTGCTGCTGCTCTCGCCTATGGTCTCGACAA 37312 >seq193 Length=97280 Score = 96.9 bits (106), Expect = 3e-14 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 ||||| ||||| || || || |||||||||||||| || ||||| |||||||| | || Sbjct 70216 ACTGTCCCAGCCTACTTCAACGACTCACAACGTCAGGCCACTAAGGATGCTGGTCTCATC 70157 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 || || || ||||| || ||||| ||||| || ||||| || ||||| | || || || Sbjct 70156 GCCGGCCTCAATGTCCTCCGTATCATCAACGAGCCTACCGCCGCTGCCATCGCCTACGGT 70097 Query 550529 CTTGATAA 550536 || || || Sbjct 70096 CTCGACAA 70089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029209269403600