Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bipolaris_20oryzae_20[genbank_20GCA_5F001675385.1_202016-06-22] 1,640 sequences; 31,674,030 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq1500 95.1 1e-14 >seq1500 Length=44508 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || || | || ||| | || || || || || || || || || || ||||||||||| Sbjct 4688 CCGCCACGTAGACGGAGCACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAATCGGCA 4747 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || ||| | || || | ||||||||| ||||| || | |||||| || || || || Sbjct 4748 AGCGTCCTGCCGTCCTCAAGTTGCTTACCAGCAAAGATGAGACGCTGCTGGTCAGGAGGG 4807 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || || || || || ||||| || ||||| | || | || || | |||||| Sbjct 4808 ATACCCTCCTTGTCCTGAATCTTCGCCTTTACGTTGTCAATGGTATCGCTTGATTCCACC 4867 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | ||| | ||| |||||||| | ||| || || || || ||||| Sbjct 4868 TCCAAAGTAATCGTCTTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 4914 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| ||||| || || || ||||| ||||| | || | | | || || | ||| Sbjct 5452 TGGAGGGTGGATTCCTTCTGAATGTTGTAGTCGGCAAGGGTGCGGCCGTCCTCAAGCTGC 5511 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || || || ||||||||||| || || || || ||||| || || || ||||| || Sbjct 5512 TTGCCGGCGAAGATCAAACGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCCTGAATCTTC 5571 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || ||| | || | ||||| || | || || || || |||| || |||||||| Sbjct 5572 GCCTTGACATTGTCGATGGTGTCGGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGT 5630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396270479385480