Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bipolaris_20oryzae_20[genbank_20GCA_5F001675385.1_202016-06-22] 1,640 sequences; 31,674,030 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq1500 91.5 1e-13 >seq1500 Length=44508 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | |||||| || || || ||| || || |||||||| || | ||| | || Sbjct 4925 AGACGGAGCACCAAGTGAAGTGTCGACTCCTTCTGGATATTGTAGTCGGCAAGAGTACGG 4984 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || ||||||||||| || ||||| || || || || || || | |||| || ||| Sbjct 4985 CCATCTTCCAACTGCTTGCCCGCAAAGATGAGACGTTGCTGGTCTGGAGGAATACCTTCC 5044 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||||| || || | | || || || | ||| ||||||| ||| Sbjct 5045 TTGTCCTGAATCTTTGCCTTGACGTTGTCAATAGTATCCGAAGACTCGACCTCCAGCGTG 5104 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| |||| || || || || |||||||| Sbjct 5105 ATGGTCTTTCCAGTCAGTGTCTTGACGAAGATCTGCAT 5142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380929986009720