Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bipolaris_20oryzae_20[genbank_20GCA_5F001675385.1_202016-06-22] 1,640 sequences; 31,674,030 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq50 311 2e-79 seq1363 150 3e-31 >seq50 Length=66349 Score = 311 bits (344), Expect = 2e-79 Identities = 1058/1630 (65%), Gaps = 64/1630 (4%) Strand=Plus/Minus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || ||||| | |||| ||| || ||| ||||||| || ||||||||||||||||| Sbjct 65482 ACAGTGAACTGAATTGGAGCAGAGGCGGCCATGGTGCGGAGGTAGTACATGCCGGTCTTG 65423 Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTGTGAGTTTCTTCAGCTTAATATTC 212669 || || ||| ||| ||| | |||||| | |||| |||| | | | Sbjct 65422 AGACCAAGCTT---CCATCCGGCAAAGTGCATCGAGGTGA---TCTTGCCCATGGT---- 65373 Query 212670 TGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCC 212729 ||| |||| || || | |||||| ||||| ||| || ||||| | | Sbjct 65372 TGGC--TCCTT------CATGTGAATGTTCAGCGACTGTGACTGATCAATGAAAGCACCA 65321 Query 212730 CTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATT 212789 | |||||| ||||| | ||||| || ||| |||| ||||| ||||||||| ||| Sbjct 65320 CGGTCAGCAGCCATCTGAATGATGGTTCGCTGCGAGATTTCCCAAACGGTCTTGTAGAGC 65261 Query 212790 TCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAG--ACC-CCCTGTGTA-TGGT 212845 ||| ||||| |||| | |||||| | |||| | ||| |||| | | | | Sbjct 65260 GTCTTGGTCTCCTCAGGGATGTTGGGGATTCT-TGCAATGGAACCACCCTCGGCAATAAT 65202 Query 212846 CAGCTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTG 212905 | | | ||||| ||| ||| |||||| || | || ||||| ||| Sbjct 65201 GCGGTTCTT---CATGTTCTCAGACCACAGGCCCATGTCGACGAGATCCTTGAGCAGCCA 65145 Query 212906 AGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTA 212965 |||||||| | |||||| ||||| | |||||| | | ||| | ||| || ||||| Sbjct 65144 TGGGTTGACAACCTGGAACTCACCCGCGAGCACACGTCGAGAGTAGATGTTAGATGTGTA 65085 Query 212966 GGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGC 213025 ||||||| || |||||||| || |||||||| | || ||| || ||||||||||| Sbjct 65084 CGGCTCGAAGCATTCGTTGTTTCCGAGAATCTGGGAGGTCGAGGCAGTTGGCATGGGAGC 65025 Query 213026 CACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTC 213085 | || | | ||| | || || || | | || | | | |||||||||||| Sbjct 65024 GATCAACAAAGAGTTGCGTACACCATGTTGAGCAATCTTGGCCTTCAACTCTGCCCAGTC 64965 Query 213086 CCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTT 213145 ||| ||||| | | ||||||||||| || |||| | | | || | Sbjct 64964 CCAG---------AGGTCGGTGGGGGTGACGTTCCACATATCGTACTGAAGGGTTCCCTG 64914 Query 213146 GCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGA 213205 ||||| |||| ||| | || || ||| |||||||||| | |||||||| Sbjct 64913 AGAAACGGGAGATCCCTCGTAGGTCTCATATGGACCAAGCTCCTTGGCAATGTCGCAGGA 64854 Query 213206 CGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTC 213265 | || ||||||| ||||||||| || || |||| ||||||||||||||||||| Sbjct 64853 AGAAGTAAGAGCAGCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTC 64794 Query 213266 TGGGGACGTGAAGGGCA-TCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGA 213324 || ||| ||| |||| | ||||| |||| |||| ||||| || || || || | Sbjct 64793 TGCCGACTCGAAAGGCAGGCGCAATGCG-AGGAAAGCATCGGCCAGACCTTGTACGCCCA 64735 Query 213325 TGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAG-CACTCCTCCAAGGGGTAAAAGTTG 213383 | ||||| |||| ||| | | ||| | || | |||||| | |||||| |||| Sbjct 64734 TACCGATAGGTCGGTGACGGAAGTT-GCTGCGGCGTGCCTCCTCAACGGGGTAGTGGTTG 64676 Query 213384 CAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCG 213443 || ||||||||||| | |||||||||| | || | |||||| | | || | || | Sbjct 64675 ACTTCAATGATCTTGTTCAAGTTGCGGGTGACAACCTGGGTGACCTCGTGAAGCTTCTGG 64616 Query 213444 TGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTG 213503 | ||| || | | || | ||||| |||||||| | || || ||| Sbjct 64615 AAGTCAAACTCGCCACGCTTGTAGTCAACAAAAGAGGGCAGGGCAAGAGAAGCAAGATTG 64556 Query 213504 CAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCAT 213563 ||||| || ||||| | || | | |||||||| | ||||| |||||||||||| || Sbjct 64555 CAAACAGCAACCTCATCAGGGGCAGTGTACTCGACAATCTCCGTGCACAGGTTGGAGCTA 64496 Query 213564 CGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATG 213623 ||||| ||||||| ||||| ||||| ||| |||| || ||||||||||||||| Sbjct 64495 CGGATAGTGCCCAAGTTCTTCTGGTTGCTCTTACGGTTGCAAGCATCCTTGTAGAGCATA 64436 Query 213624 TAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTG 213683 ||||| || || || ||||| | || || | ||| || | | ||| | Sbjct 64435 AAGGGGTTACCAGTTTCGGTCTGGGCTTCGAGGATGGCGTACCACAGCTTCTGGGCGCGG 64376 Query 213684 ACCACCCGCCTGACAGCTCCGGGCGTAGC--CTCGTACTGTTCGTAGAGCTCGTTGAATT 213741 | | | | || || || | || |||||| ||||| || | | || | Sbjct 64375 A----CAGTTTCACGGC-CCTTGTTCTGCTTCTCGTAGCTCTCGTACAGAGCCTCAAACT 64321 Query 213742 CGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCC 213801 | | || |||| | || || || || ||| |||||||| |||| |||| Sbjct 64320 CATCACCGTAGACGTCAGCGAGGCCGGGGCACTCGTTGGGGCACATGAGAGTCCACTCCC 64261 Query 213802 CGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCC 213861 ||| || ||| | || ||||||||| || |||| |||||| ||| |||||| || | Sbjct 64260 CGTTCTCCTGGACACGCTTCATGAACAGATCGGGGATCCACAGAGCGTAGAACAGATCAC 64201 Query 213862 TGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCG 213921 || | ||| || || ||| ||||| ||||| || ||| |||||| || | Sbjct 64200 GGGCGCGAACCTCCTCTTTGCCGTGGTTCTTGCGGAGATCAAGGAAGCCAAAGACATCGG 64141 Query 213922 CGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCA 213978 ||||||| ||||| | ||| |||||||| || || | || | ||||| |||||||| | Sbjct 64140 CGTGCCATGGCTCAAGGTAAATGGCAAAAGCACCGGGGCGCTTGTTGCCACCCTGGTCGA 64081 Query 213979 CCAGCCTGGCCACCA----TGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGT 214034 | | || | || ||||| | | || || | || | || ||||| || | Sbjct 64080 ----CGTAGCGAGCAGTGTTGTTGTACACACGGAGCATAGGAATGAGACCGTTTGATGTT 64025 Query 214035 CCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCA--GGTTGCTCATGGAGAGCCCTA 214092 |||||||| || | || || ||||| | || | | | || | | |||| || | Sbjct 64024 CCGTTGGTGCCACCAATGTATGAGCCAGTAGCACGAATTCGGTGGACGTTGAGA--CCAA 63967 Query 214093 TGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCA 214152 | || || ||| ||||||||||| ||| ||| | | | || || ||| ||| | | Sbjct 63966 TACCGCCAGCGGTCTTGGAGATCAAGGCACAGGTCTTGAGTGTATCGTAGATACCGTCAA 63907 Query 214153 TGCTGTCATC 214162 ||||||| || Sbjct 63906 TGCTGTCCTC 63897 >seq1363 Length=52244 Score = 150 bits (166), Expect = 3e-31 Identities = 347/521 (67%), Gaps = 19/521 (4%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | ||||| |||||||| ||||| || | | |||||||||||| Sbjct 38886 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCAAGCGAGATGTTCTC 38827 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAG 47958 ||||||| ||||||||| | | || || ||| || ||||| ||||| Sbjct 38826 CATGAAGTCGAAGGGGTTCGTGGCGTGGTAGACCTTGGTGTTGCCCAGAGCGAGAAGCAG 38767 Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGA 48018 | || || ||| |||| ||||| | ||||||| || ||||||||| ||| | Sbjct 38766 ACGGTCAGCAACGAACTCAATGTACTGGCACATGAGCTTGGCGTTCATGCC---GAGCAA 38710 Query 48019 CACG---GGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAAT 48075 || |||| || | | || ||||| | ||| || || || || | || Sbjct 38709 AGCGCATGGCAGGGCGTCGCTAAGGAACTCTTGCTCAATGGCAACAGCCTCGGTGATGAT 38650 Query 48076 CTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAG-----CATG 48130 || || ||||| || | | || |||| | | | |||| || | Sbjct 38649 GGCCTGGACA---GACTCC-----TTGCTGGGGCGGGTGTTGAGAAGAGAGAAGAGCAGG 38598 Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190 ||||| ||||| |||||| ||| ||||| || ||||||| |||||||||| ||| Sbjct 38597 CAGGCGAAGTCGGTGTGCATGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTAAGA 38538 Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250 |||||||| | || | || ||||||||||| || | || || || ||| ||||||| Sbjct 38537 CCAGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGATGCAAATGATCCACTGAAGAAG 38478 Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310 || ||||| || || ||||| || ||| | | | || | | ||||||||| ||| Sbjct 38477 ATACCCTCGACGGCAGCGAATGCAACGAGACGGTTGGCAAAGGTGGAGTTCTTGTCAGAG 38418 Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 ||||| || |||||||| |||||||| |||||| || Sbjct 38417 ATCCATCGCAGAGCCCAGTCGGCCTTCTTGCGGATGCAGGG 38377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931513703577600