Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bipolaris_20oryzae_20[genbank_20GCA_5F001675385.1_202016-06-22] 1,640 sequences; 31,674,030 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq1112 87.8 2e-12 >seq1112 Length=120617 Score = 87.8 bits (96), Expect = 2e-12 Identities = 151/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 139298 CATATTTGCGAGCAGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAAT 139357 |||||| || | || || ||||||||||| ||||| || ||||| || || | | ||| Sbjct 3098 CATATTGGCCAAAAGAGCCTGTGCTGTGCAAATGTTGCTCGTTGCCTTCTCGCGGCGAAT 3157 Query 139358 ATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGA 139417 |||||||| | ||| || || || | || ||| | ||||| || ||| || Sbjct 3158 GTGCTGCTCACGAGTCTGCAGGGCAAGTCGTGCTGCCTGGTTGCCGAGCCTATCCTTGGA 3217 Query 139418 CTGACCTACAATTCTGCCAGGTATCTTTCTCTTATACTTGTCTGTTG-TTGCAAAGAATG 139476 |||| | | | ||||| ||||| | ||||||||| || || | |||||||| | Sbjct 3218 AAGACCGATCAAGCGACCAGGAATCTTACGCTTATACTTCTC-GTCGCAGGCAAAGAAAG 3276 Query 139477 CAGCATGAGGACCTCCGTATCCCATAGGAATACCAAA 139513 | ||||| || || ||| | |||| ||| | |||||| Sbjct 3277 CGGCATGTGGTCCACCGAAGCCCAGAGGCACACCAAA 3313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578986530532800