Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bipolaris_20oryzae_20[genbank_20GCA_5F001675385.1_202016-06-22] 1,640 sequences; 31,674,030 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq50 324 2e-83 seq1283 91.5 2e-13 >seq50 Length=66349 Score = 324 bits (358), Expect = 2e-83 Identities = 1114/1725 (65%), Gaps = 19/1725 (1%) Strand=Plus/Plus Query 75219 ACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGA 75278 ||||| ||||||| ||||| | || || ||||| || |||||||| | | | |||| Sbjct 63730 ACATGCTCATGCGTGTCGCTGTTGGTATTCACGGCGAGGACATTGAGAAGGCCATTGAGA 63789 Query 75279 CATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTG 75338 | || ||| | ||||| ||| |||| ||||| |||| || || |||||||| | Sbjct 63790 CCTATGACTACATGTCACAAAAATACTTCACACACGCCTCACCGACACTGTTCAATGCAG 63849 Query 75339 GTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCA 75398 | || || || |||||||| |||||||| |||| | ||||||||| || Sbjct 63850 GCACTCCCTCGCCTCAGATGTCTTCATGCTTCCTCATCGATATGAAGGAGGACAGCATTG 63909 Query 75399 ACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTG 75458 |||||||||| | || || | | ||||| ||||| ||| ||||| ||||||| Sbjct 63910 ACGGTATCTACGATACACTCAAGACCTGTGCCTTGATCTCCAAGACCGCTGGCGGTATTG 63969 Query 75459 GGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAAT 75518 | | || |||| | | || | | || ||| | || || || || || Sbjct 63970 GTCTCAACGTCCACCGAATTCGTGCTACTGGCTCATACATTGGTGGCACCAACGGAACAT 64029 Query 75519 CAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAG 75578 || | ||| | ||||| ||||| || || | ||| ||| || ||||| || | || | Sbjct 64030 CAAACGGTCTCATTCCTATGCTCCGTGTGTACAACAACACTGCTCGCTACGTCGACCAGG 64089 Query 75579 CGGGGCGTC----GCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCATGCCGATATC 75634 | ||| | || || | | || | ||| | || |||||||| |||||| || Sbjct 64090 -GTGGCAACAAGCGCCCCGGTGCTTTTGCCATTTACCTTGAGCCATGGCACGCCGATGTC 64148 Query 75635 ATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTC 75694 | | |||||||| | || ||||| || | || |||| ||| | ||||| Sbjct 64149 TTTGGCTTCCTTGATCTCCGCAAGAACCACGGCAAAGAGGAGGTTCGCGCCCGTGATCTG 64208 Query 75695 TTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGG 75754 || | | |||||||| || || || ||||||||||| || ||||| || | ||| Sbjct 64209 TTCTACGCTCTGTGGATCCCCGATCTGTTCATGAAGCGTGTCCAGGAGAACGGGGAGTGG 64268 Query 75755 TCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAA 75814 |||| | || || || || || || ||| | |||| ||||| |||||||| Sbjct 64269 ACTCTCATGTGCCCCAACGAGTGCCCCGGCCTCGCTGACGTCTACGGTGATGAGTTTGAG 64328 Query 75815 GCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGAT 75874 || || ||| | || || || || | | | || ||||| | ||| | || Sbjct 64329 GCTCTGTACGAGAGCTACGAGAAGCAGAACAAGGGCCGTGAAACTGTCCGCGCC-CAGAA 64387 Query 75875 GTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAA 75933 | | ||| | || || ||| || | ||||| || ||||| | || | |||||| ||||| Sbjct 64388 GCTGTGGTACGCCATCCTCGAAGCCCAGACCGAAACTGGTAACCCCTTTATGCTCTACAA 64447 Query 75934 GGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCT 75993 ||||||||| ||| ||||| ||||| ||||| ||||| || ||| ||||| || || Sbjct 64448 GGATGCTTGCAACCGTAAGAGCAACCAGAAGAACTTGGGCACTATCCGTAGCTCCAACCT 64507 Query 75994 TTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATC 76053 |||||||| ||| | |||||||| | |||||| |||||||||||| | || || Sbjct 64508 GTGCACGGAGATTGTCGAGTACACTGCCCCTGATGAGGTTGCTGTTTGCAATCTTGCTTC 64567 Query 76054 AATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCA 76113 | ||||| || | ||| | | || | || ||||| | | || ||||| Sbjct 64568 TCTTGCCCTGCCCTCTTTTGTTGACTACAAGCGTGGCGAGTTTGACTTCCAGAAGCTTCA 64627 Query 76114 TGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCC 76173 || |||| || |||| ||| || | ||| ||||||| || || || Sbjct 64628 CGAGGTCACCCAGGTTGTCACCCGCAACTTGAACAAGATCATTGAAGTCAACCACTACCC 64687 Query 76174 CGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGG 76233 ||||||| || || || | || ||| ||||||| ||| |||| || ||||| Sbjct 64688 CGTTGAGGAGGCACGCCGCAGCAACTTCCGTCACCGACCTATCGGTATGGGCGTACAAGG 64747 Query 76234 TCTCGCGGATGTATTTAT---TTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGA 76290 ||| || |||| || | ||| || || | | || || || | || |||||| | Sbjct 64748 TCTGGCCGATGCTTTCCTCGCATTGCGC--CTGC-CTTTCGAGTCGGCAGAGGCCAAGAA 64804 Query 76291 GATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATT 76350 | | || | ||||| || ||||| || ||||| | || | || || | Sbjct 64805 GCTCAACATCCAGATCTTCGAGACCATCTACCACGCTGCTCTTACTTCTTCCTGCGACAT 64864 Query 76351 GGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCT 76410 || | | | ||| | |||||||| | ||||| ||||||| || || || || Sbjct 64865 TGCCAAGGAGCTTGGTCCATATGAGACCTACGAGGGATCTCCCGTTTCTCAGGGAACCCT 64924 Query 76411 TCAGTTTGATATGTGGGAAGGTGAAACCAAGC-TCAACTACGACTGGGATGTTCTCAAGG 76469 ||||| ||||||| |||| || | || | | | || ||||||| | | |||| Sbjct 64925 TCAGTACGATATGT-GGAACGTCACCCCCACCGACCTCTGGGACTGGGCAGAGTTGAAGG 64983 Query 76470 AACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCT 76529 || | | ||| | || ||| | | ||||| || || |||||||| |||| Sbjct 64984 CCAAGATTGCTCAACATGGTGTACGCAACTCTTTGTTGATCGCTCCCATGCCAACTGCCT 65043 Query 76530 CCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTACC 76589 | ||| | || || | || || || |||||||| || || |||||| | ||||||||| Sbjct 65044 CGACCTCCCAGATTCTCGGAAACAACGAATGCTTCGAGCCGTACACATCTAACATCTACT 65103 Query 76590 TGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTCGTCAATGACCTCA 76649 || | ||||| |||||||| |||||||| || |||| || ||| Sbjct 65104 CTCGACGTGTGCTCGCGGGTGAGTTCCAGGTTGTCAACCCATGGCTGCTCAAGGATCTCG 65163 Query 76650 AGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCA 76709 | || || || ||||| || | |||||| | | ||| | | ||||||||||| Sbjct 65164 TCGACATGGGCCTGTGGTCTGAGAACATGAAGAACCGCATTATTGCCGAGGGTGGTTCCA 65223 Query 76710 TTCAAAATATCTCAGATATCCCAGATGATATCAAGAATCTCTACCGCACAGTGTGGGAAA 76769 || || ||| | | ||||| || || | ||||| |||||| || || ||||||| Sbjct 65224 TTGCAAGAATCCCCAACATCCCTGAGGAGACCAAGACGCTCTACAAGACCGTTTGGGAAA 65283 Query 76770 TCAAGATGAAAGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTC 76829 || | | | ||||| | ||||| || || |||||| |||||||||| |||| Sbjct 65284 TCTCGCAGCGAACCATCATTCAGATGGCTGCTGACCGTGGTGCTTTCATTGATC--AGTC 65341 Query 76830 AAAGT--ATGAATCTATTCATGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCATAT 76887 | ||| |||| | |||| | ||||| ||| |||| || | || ||||| | Sbjct 65342 ACAGTCGCTGAACATTCACATGAAGGAGCCAACCATGGGCAAGATCACCTCGATGCACTT 65401 Query 76888 GTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTACTATCTCCG 76932 || ||||| | || ||||| ||||| |||||||| ||||| Sbjct 65402 TGCCGGATGGAAGCTTGGTCTCAAGACCGGCATGTACTACCTCCG 65446 >seq1283 Length=43926 Score = 91.5 bits (100), Expect = 2e-13 Identities = 329/507 (65%), Gaps = 27/507 (5%) Strand=Plus/Plus Query 175186 TTCAGTGATGTTGAGGGGATTGACGCCGCCAAAGATGAACTTGAAGAGATTGTGGATTTT 175245 |||||||| |||| || || || | ||||| | || || ||| |||| ||| Sbjct 16219 TTCAGTGACGTTGCCGGCATGGATGAGGCCAAGCAGGAGATTATGGAGTTTGTCTCCTTT 16278 Query 175246 CTCAAGCAACCCGAGAGATATTTTGGAAGT--GGTGCCAAGATCCCCCGAGGCGCCCTTC 175303 |||||| | |||| ||| | |||| || || |||||||| || || ||| ||| Sbjct 16279 CTCAAGGATCCCGGCCGAT--TCCAGAAGCTCGGCGCAAAGATCCCTCGTGGTGCCATTC 16336 Query 175304 TCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCAA 175363 || | || |||||||| || ||||| ||||| ||| || | ||| || || || Sbjct 16337 TCTCTGGATCCCCAGGTACTGGTAAGACACTCCTTGCCAAGGCTACCGCTGGAGAGTCGG 16396 Query 175364 ATGTCCCATTCATCCAGTG-CTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGGT 175422 ||| || ||| || |||| | || || | || || ||||||||||| ||||| ||| Sbjct 16397 GTGTACCCTTCTTC-AGTGTCAGTGGATCAGAGTTCGTCGAGATGTTTGTAGGTGTTGGT 16455 Query 175423 GCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATTGTCTTC 175482 || | || | || || || | | || || | | | |||||| || ||||| Sbjct 16456 GCTTCGCGAGTCAGAGACCTGTTCGCCAATGCGCGGAAGAGTACACCATGCATCATCTTC 16515 Query 175483 ATTGATGAGATTGATGC----GGTGG-----GCAAGCAACGCAGCGCTGGTGGTATGCCA 175533 || ||||| || ||||| ||| | | | ||| | | ||||||| Sbjct 16516 ATCGATGAAATCGATGCCATTGGTCGTGCTCGTTCGAAACAAAACTTTGGTGGT------ 16569 Query 175534 GCAAATGACGAGAGAGAACAAACAATTAATCAACTACTCACCGAGATGGATGGCTTTGAC 175593 | || |||||| | ||| || | ||||| | ||||||||||||||||| || | Sbjct 16570 GGCAACGACGAGCGTGAAGCCACCCTCAATCAGATCCTCACCGAGATGGATGGTTT---C 16626 Query 175594 AATGAGACTG-GCA--TTGTGGTTATTGCGGCCACTAATCGCGTGGATATCCTTGATGAC 175650 ||| |||| ||| | || || |||| | || ||||| ||| | || ||| | Sbjct 16627 AATACCACTGAGCAAGTAGTTGTCCTTGCAGGTACCAATCGACCGGACGTTCTGGATAAG 16686 Query 175651 GCCCTCCTTCGCCCGGGTCGTTTTGAT 175677 ||||| | || || |||||||| ||| Sbjct 16687 GCCCTTATGCGACCTGGTCGTTTCGAT 16713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596557370323200