Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bipolaris_20oryzae_20[genbank_20GCA_5F001675385.1_202016-06-22] 1,640 sequences; 31,674,030 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq168 107 2e-18 seq1500 82.4 6e-11 >seq168 Length=82486 Score = 107 bits (118), Expect = 2e-18 Identities = 224/332 (67%), Gaps = 4/332 (1%) Strand=Plus/Plus Query 34318 TCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGC 34377 || || || ||||| | |||| | || | || |||||| ||||| || || || Sbjct 64911 TCGGTTTCGGGGTTCTTGCATTTCTTGCAGAGGACGAACTTGGAAATGAAGCCGTCGAGG 64970 Query 34378 AGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAA 34437 |||||| | ||| || |||||||| |||||||| ||| | || |||| ||| Sbjct 64971 TAGTCCTGCAGCTTGCTGGCGTCGTGGGCGCCGTTGATGATCCAGCGGTCGTCGTTGGGG 65030 Query 34438 TCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTT--TGTCGGGTAAATGGCCG 34495 | | || || || || || ||| | || |||||||| || || | | || | Sbjct 65031 CTGGTGTTTGTCTGGGCTCCAAGTTCGAAACCAAAGTACTTGATGACGTGAGCAGGG--G 65088 Query 34496 GACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGC 34555 | || | |||| |||| || | |||||| |||||||||||||||||||||| Sbjct 65089 GGCGGGCGAGCGAGCCAGCGACGCTGGTTAGGTTGACAATGACAGTCTTGATGCCGTTGC 65148 Query 34556 CCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCA 34615 |||| || || | ||||| ||| ||| ||| |||||||||||||| | ||| | | Sbjct 65149 CCTTGCCCTCAATCTTGGACTGGATACGCTCCATCTTGTAGCGGTAGAAGGGGTCGGTGA 65208 Query 34616 CATTGCGGTTAACGTTCACAGTCCCCATCGTG 34647 ||| |||| || ||| || || |||| ||| Sbjct 65209 CATCGCGGCGAATGTTGACGGTGGCCATGGTG 65240 >seq1500 Length=44508 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| || ||||| ||| | |||||||| || ||||| | || ||| | | Sbjct 4914 ATGCAAATCTTCGTCAAGACTCTCACCGGCAAGACGATTACTTTGGAGGTGGAATCAAGC 4855 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| | | | | ||||| ||||||| ||||| || || | || || || Sbjct 4854 GATACCATTGACAACGTAAAGGCGAAGATTCAGGACAAGGAGGGTATCCCTCCTGACCAG 4795 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || | || || | ||| ||||| || || ||||| | ||| || | || ||||||||| Sbjct 4794 CAGCGTCTCATCTTTGCTGGTAAGCAACTTGAGGACGGCAGGACGCTTGCCGATTACAAC 4735 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTG 110482 || || || || || ||| | ||| ||||| Sbjct 4734 ATCCAGAAGGAGTCCACGCTCCACTTGGTG 4705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412833348328520