Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bipolaris_20oryzae_20[genbank_20GCA_5F001675385.1_202016-06-22]
1,640 sequences; 31,674,030 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq1500 102 5e-17
>seq1500
Length=44508
Score = 102 bits (112), Expect = 5e-17
Identities = 155/218 (71%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593
||| | |||||| || || ||| ||| || || ||||||||||||| || || | |
Sbjct 4699 ACGGAGCACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAATCGGCAAGCGTCCTGCC 4758
Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653
||| || | ||| || || ||||| || | ||||||||| || | || | ||| || ||
Sbjct 4759 GTCCTCAAGTTGCTTACCAGCAAAGATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTT 4818
Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712
||| ||| ||| | | || | ||| | ||| |||||||||||||| || | || |
Sbjct 4819 GTCCTGAATCTTC-GCCTTTACGTTGTCAATGGTATCGCTTGATTCCACCTCCAAAGTAA 4877
Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|||| || || || | || || || ||||| ||||||
Sbjct 4878 TCGTCTTGCCGGTGAGAGTCTTGACGAAGATTTGCATA 4915
Score = 84.2 bits (92), Expect = 1e-11
Identities = 158/230 (69%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | || ||| | |||||| || || || ||| || || || ||||| ||||
Sbjct 4915 ACCACCACGCAGACGGAGCACCAAGTGAAGTGTCGACTCCTTCTGGATATTGTAGTCGGC 4974
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || || | || ||||| || || || ||||| || | ||| ||||| ||| | ||
Sbjct 4975 AAGAGTACGGCCATCTTCCAACTGCTTGCCCGCAAAGATGAGACGTTGCTGGTCTGGAGG 5034
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCA 33700
| |||||| ||||| ||| || || | || | |||| || || || || |
Sbjct 5035 AATACCTTCCTTGTCCTGAATCTT-TGCCTTGACGTTGTCAATAGTATCCGAAGACTCGA 5093
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | |||||| || || || || | || || || ||||||||||||
Sbjct 5094 CCTCCAGCGTGATGGTCTTTCCAGTCAGTGTCTTGACGAAGATCTGCATA 5143
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328697430028800
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |