Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bipolaris_20oryzae_20[genbank_20GCA_5F001675385.1_202016-06-22] 1,640 sequences; 31,674,030 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq1500 141 9e-29 seq50 113 5e-20 seq1257 82.4 8e-11 >seq1500 Length=44508 Score = 141 bits (156), Expect = 9e-29 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || ||||| || ||||||||||| ||||||||||||||| || Sbjct 5428 CCACCACGGAGGCGGAGGACAAGGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCGGCA 5487 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | ||| || ||||| ||||| || || |||||||||||||| || || || Sbjct 5488 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCTGGTGGG 5547 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || ||||| || ||||| ||| | |||||||| || || || Sbjct 5548 ATGCCCTCCTTGTCCTGAATCTTCGCCTTGACATTGTCGATGGTGTCGGAGGACTCAACC 5607 Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689 ||||| || ||||| || ||||| Sbjct 5608 TCGAGGGTGATGGTCTTGCCGGT 5630 Score = 113 bits (124), Expect = 5e-20 Identities = 136/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 ||||| || || || || ||||| ||||||||||||||| ||| ||| | ||| || Sbjct 5162 ACGAGATGCAGAGTAGACTCCTTCTGAATGTTGTAGTCGGCAAGGGTTCGGCCGTCCTCA 5221 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 || || || || || ||||||| ||||||||| || || || ||||| || || || || Sbjct 5222 AGTTGCTTTCCGGCGAAAATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 5281 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| ||| | |||||||| || || || ||||| || ||||| || Sbjct 5282 ATCTTGGCCTTGACATTGTCGATGGTGTCGGAGGACTCAACCTCGAGGGTTATGGTCTTT 5341 Query 134685 CCGGT 134689 ||||| Sbjct 5342 CCGGT 5346 >seq50 Length=66349 Score = 113 bits (124), Expect = 5e-20 Identities = 864/1386 (62%), Gaps = 47/1386 (3%) Strand=Plus/Plus Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623 ||||||||||| |||| || || || || ||||||||||| |||||||| ||| | Sbjct 63726 CAACACATGCTCATGCGTGTCGCTGTTGGTATTCACGGCGAGGACATTGAGAAGGCCATT 63785 Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCC 7683 || || || | ||||| ||| | || || ||||| || || || |||| Sbjct 63786 GAGACCTATGACTACATGTCACAAAAATACTTCACACACGCCTCACCGACACTGTTCAAT 63845 Query 7684 GCGGGCACAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGC 7743 || ||||| | ||||||| |||| || || || | | ||| || |||||| Sbjct 63846 GCAGGCACTCCCTCGCCTCAGATGTCTTCATGCTTCCTCATCGATATGAAGGAGGACAGC 63905 Query 7744 ATCGACGGCATTTACAACACGCTGCGCGAT-TGCGCCAATATTTCCAAATACGGCGGCGG 7802 || ||||| || ||| | || || | || || ||| || ||||| || ||||| Sbjct 63906 ATTGACGGTATCTACGATACACT-CAAGACCTGTGCCTTGATCTCCAAGACCGCTGGCGG 63964 Query 7803 AATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACGG 7862 || ||||| ||||| || | || || | || ||| | ||||||||| Sbjct 63965 TATTGGTCTCAACGTCCACCGAATTCGTGCTACTGGCTCATACATTGGTGGCACCAACGG 64024 Query 7863 AAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGA 7922 || | | | |||| | || ||| | || |||| ||| ||| | | || | || || Sbjct 64025 AACATCAAACGGTCTCATTCCTATGCTCCGTGTGTACAACAACACTGCTCGCTACGTCGA 64084 Query 7923 CCAGGGGGGAAA---GCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGA 7979 |||||| || || |||| || || |||||| || | ||||| |||||||| || Sbjct 64085 CCAGGGTGGCAACAAGCGCCCCGGTGCTTTTGCCATTTACCTTGAGCCATGGCACGCCGA 64144 Query 7980 CATTTACGCAGTGCTAAATCTGCGTCGCAACATGGGTTGCGAAGAC-AGCAAAGCGCGCG 8038 | | | | || |||| || ||| || | |||| || |||| || Sbjct 64145 TGTCTTTGGCTTCCTTGATCTCCGCAAGAACCACGG---CAAAGAGGAGGTTCGCGCCCG 64201 Query 8039 --ATCTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGTTCATTTCGACGC 8096 |||| |||| || ||||| | ||||||||||| |||| ||| || || ||| Sbjct 64202 TGATCTGTTCTACGCTCTGTGGATCCCCGATCTGTTCATGAAGCGTGTCCAGGAGAACGG 64261 Query 8097 ACAATGGTCGCTCATGTGCCCCGATCGTTGCCCTTTATTAAAAAACGTTTACGGTTCAAA 8156 | ||| | |||||||||||| | ||||| | |||| |||||| | Sbjct 64262 GGAGTGGACTCTCATGTGCCCCAACGAGTGCCCCGGCCTCGCTGACGTCTACGGTGATGA 64321 Query 8157 ATTTGAACAATTGTACAAACAATACGAACACGACGGCGCGTACGTGCGGCAAGTGAAAGC 8216 ||||| ||||| | ||||| | | | || | | | |||||| Sbjct 64322 GTTTGAGGCTCTGTACGAGAGCTACGAGAAGCA------GAACAAGGGCC--GTGAAACT 64373 Query 8217 G--CGCGACCTGCACCG------CGCCATTATCGAATGTCAAAACGAAACCGGTATGCCG 8268 | |||| || | | | |||||| ||||| || | |||||| |||| || Sbjct 64374 GTCCGCGCCCAGAAGCTGTGGTACGCCATCCTCGAAGCCCAGACCGAAACTGGTAACCCC 64433 Query 8269 TACATGCTGTACAAAGACGCTTGCAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATT 8328 | ||||| ||||| || ||||||||| || ||||| || | ||| ||||||| || Sbjct 64434 TTTATGCTCTACAAGGATGCTTGCAACCGTAAGAGCAACCAGAAGAACTTGGGCACTATC 64493 Query 8329 TGTTGCAGCAATCTGTGCGCTGAAATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTT 8388 || || ||| |||||| | || ||||| |||||| || || || || || || ||| Sbjct 64494 CGTAGCTCCAACCTGTGCACGGAGATTGTCGAGTACACTGCCCCTGATGAGGTTGCTGTT 64553 Query 8389 TGCAATCTAGCGTCGGTGTGTTTAAACGCGTTCGTTGATCGACGCTCAAACACTTACGAC 8448 |||||||| || || | | | | || ||||| || || | ||| Sbjct 64554 TGCAATCTTGCTTCTCTTGCCCTGCCCTCTTTTGTTGA------CTACAAGCGTGGCGAG 64607 Query 8449 TTTGAACAATTGAAAAACGCCGTGCAAGTGAC---GGTA------CGCAATTTAGATCGC 8499 ||||| | | || | | | | || || ||| ||||| || | Sbjct 64608 TTTGACT--TCCAGAAGCTTCACG-AGGTCACCCAGGTTGTCACCCGCAACTTGAACAAG 64664 Query 8500 ATCATTGATGTCAATTTTTATCCCTTGGAAGAAGCGCGC-GTATCGAACATGCGCCACAG 8558 |||||||| ||||| || ||| | || || || ||| | | | ||| | || ||| | Sbjct 64665 ATCATTGAAGTCAACCACTACCCCGTTGAGGAGGCACGCCGCAGC-AACTTCCGTCACCG 64723 Query 8559 ACCCGTTGGCGTGGGCGTGCAAGGTCTGGCCGACGCGTTTGCCATGTTGCGCCTCCCCTA 8618 ||| | || ||||||| |||||||||||||| || || | |||||||| || | Sbjct 64724 ACCTATCGGTATGGGCGTACAAGGTCTGGCCGATGCTTTCCTCGCATTGCGCCTGCCTTT 64783 Query 8619 CGAAAGCCAAGAAGCGCGCATGCTCAACATAAAAATAGCGGAAACGGTGTATTACGGCGC 8678 ||| ||| || | ||||||||| | || || || | || ||| || Sbjct 64784 CGAGTCGGCAGAGGCCAAGAAGCTCAACATCCAGATCTTCGAGACCATCTACCACGCTGC 64843 Query 8679 ATTAGAAGCCAGCTGTCAACTTGCCCGAGAATTGGGCACGTACGAATCGTACGCGGGCAG 8738 | | ||| | ||||| || | || | || || | |||| ||| Sbjct 64844 TCTTACTTCTTCCTGCGACATTGCCAAGGAGCTTGGTCCATATGAGACCTACGAGGGATC 64903 Query 8739 CCCTGCCAGCCGCGGAATATTGCAATACGACATGTGGAATGTCACGCCCACCTCTTTGTG 8798 || | | |||| | || ||||| |||||||| ||||| |||||| | || Sbjct 64904 TCCCGTTTCTCAGGGAACCCTTCAGTACGATATGTGGAACGTCACCCCCACCGACCTCTG 64963 Query 8799 GAATTGGAGCGATTTGAAACGCAAAATTGCTCAATTCGGTTTGCGCAATTCGCTGTTGGT 8858 | | ||| || ||||| ||| ||||||||| ||| | ||||| || ||||| | Sbjct 64964 GGACTGGGCAGAGTTGAAGGCCAAGATTGCTCAACATGGTGTACGCAACTCTTTGTTGAT 65023 Query 8859 GGCTTACATGCCCACCGCCACGACTGCTCAAATAATGGGAAACAACGAATCCTTTGAGCC 8918 ||| |||||| || ||| |||| | || || | ||||||||||||| ||| ||||| Sbjct 65024 CGCTCCCATGCCAACTGCCTCGACCTCCCAGATTCTCGGAAACAACGAATGCTTCGAGCC 65083 Query 8919 GTTCAC 8924 || ||| Sbjct 65084 GTACAC 65089 >seq1257 Length=334001 Score = 82.4 bits (90), Expect = 8e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||| | ||| || || || ||||| || |||||||||||| || Sbjct 8920 CCACCACGGAGACGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCA 8861 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| |||||||| || || || || || | ||||||||| || || || Sbjct 8860 AGAGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGA 8801 Query 134607 ATGCCTTCTTTTTCT 134621 ||||| || || ||| Sbjct 8800 ATGCCCTCCTTGTCT 8786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505388039332800