Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bipolaris_20oryzae_20[genbank_20GCA_5F001675385.1_202016-06-22] 1,640 sequences; 31,674,030 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq50 105 2e-17 seq1363 89.7 2e-12 >seq50 Length=66349 Score = 105 bits (116), Expect = 2e-17 Identities = 205/295 (69%), Gaps = 16/295 (5%) Strand=Plus/Plus Query 254978 ATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAA 255037 || || ||| ||||||||| ||||||| |||||||||||||| || || ||| ||| Sbjct 64041 ATTCCTATGCTCCGTGTGTACAACAACACTGCTCGCTACGTCGACCAGGGTGGCAACAAG 64100 Query 255038 CGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGA---CATTGAACGGTTT 255094 ||||| || || || |||| ||||| ||||| ||||||||||| | ||| | || Sbjct 64101 CGCCCCGGTGCTTTTGCCATTTACCTTGAGCCATGGCACGCCGATGTCTTTG---GCTTC 64157 Query 255095 TTACTGCTGTCCGACAAGA---CCGGCACCGAGGAGCTGATCGCCCGCGACATCTACACC 255151 | || | |||| ||||| ||||| |||||| | |||||| || | | | | Sbjct 64158 CT--TGATCTCCG-CAAGAACCACGGCAAAGAGGAGGTTCGCGCCCGTGATCTGTTCTAC 64214 Query 255152 GCTGTCTGGTGCTGCGATCTGTTTATGCGACGCGTG-GAACGAG-ACGAGACCTGGAGCC 255209 ||| | ||| | ||||||||| || || ||||| | ||| ||| | |||| | Sbjct 64215 GCTCTGTGGATCCCCGATCTGTTCAT--GAAGCGTGTCCAGGAGAACGGGGAGTGGACTC 64272 Query 255210 TCATGTGTCCCAACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTTGA 255264 ||||||| |||||| | ||||| || | ||| | ||||| |||||||| Sbjct 64273 TCATGTGCCCCAACGAGTGCCCCGGCCTCGCTGACGTCTACGGTGATGAGTTTGA 64327 >seq1363 Length=52244 Score = 89.7 bits (98), Expect = 2e-12 Identities = 125/174 (72%), Gaps = 1/174 (1%) Strand=Plus/Plus Query 443696 CAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAG 443755 || ||| | | | || || || || || |||| ||||| || | || || || || | Sbjct 38433 CACCTTTGCCAACCGTCTCGTTGCATTCGCTGCCGTCGAGGGTATCTTCTTCAGTGG-AT 38491 Query 443756 CTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTA 443815 | || || |||||||||||| | || |||||||| || |||| ||||| || || | Sbjct 38492 CATTTGCATCCATCTTCTGGCTCAAGAAGCGTGGTCTGATGCCTGGTCTTACTTTCTCCA 38551 Query 443816 ACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCT 443869 |||| || ||| ||| |||||||| |||| |||||||||||| || |||| Sbjct 38552 ACGAGCTCATCTCTCGTGACGAGGGCATGCACACCGACTTCGCCTGCCTGCTCT 38605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588302625089800