Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bipolaris_20oryzae_20[genbank_20GCA_5F001675385.1_202016-06-22] 1,640 sequences; 31,674,030 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq50 295 8e-75 seq1363 113 5e-20 >seq50 Length=66349 Score = 295 bits (326), Expect = 8e-75 Identities = 1140/1764 (65%), Gaps = 33/1764 (2%) Strand=Plus/Plus Query 104229 ACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGA 104288 ||||| ||||||| || || | |||||||| || || |||||||| | | | |||| Sbjct 63730 ACATGCTCATGCGTGTCGCTGTTGGTATTCACGGCGAGGACATTGAGAAGGCCATTGAGA 63789 Query 104289 CATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTG 104348 | || ||| | ||||| ||| |||| ||||| |||| || || |||||||| | Sbjct 63790 CCTATGACTACATGTCACAAAAATACTTCACACACGCCTCACCGACACTGTTCAATGCAG 63849 Query 104349 GTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCA 104408 | || || || || ||||| |||||||| |||| | ||||||||| || Sbjct 63850 GCACTCCCTCGCCTCAGATGTCTTCATGCTTCCTCATCGATATGAAGGAGGACAGCATTG 63909 Query 104409 ACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTG 104468 |||||||||| | || || | | ||||| ||||| ||| ||||| ||||||| Sbjct 63910 ACGGTATCTACGATACACTCAAGACCTGTGCCTTGATCTCCAAGACCGCTGGCGGTATTG 63969 Query 104469 GGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAAT 104528 | | || |||| | | || | | || ||| | || || || || || Sbjct 63970 GTCTCAACGTCCACCGAATTCGTGCTACTGGCTCATACATTGGTGGCACCAACGGAACAT 64029 Query 104529 CAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAG 104588 || | ||| | ||||| ||||| || || | ||| ||| || ||||| || | || | Sbjct 64030 CAAACGGTCTCATTCCTATGCTCCGTGTGTACAACAACACTGCTCGCTACGTCGACCAGG 64089 Query 104589 CTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATC 104644 ||| | | | | || || | || | || ||||||||||||||||| ||| || Sbjct 64090 GTGG-CAACAAGCGCCCCGGTGCTTTTGCCATTTACCTTGAGCCATGGCACGCCGATGTC 64148 Query 104645 ATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCCGCGATCTC 104704 | | |||||||| | || ||||| || | ||||||| || ||| ||||| Sbjct 64149 TTTGGCTTCCTTGATCTCCGCAAGAACCACGGCAAAGAGGAGGTTCGCGCCCGTGATCTG 64208 Query 104705 TTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGG 104764 |||| |||||| ||||| || ||||| ||||||||| | || |||||| || | ||| Sbjct 64209 TTCTACGCTCTGTGGATCCCCGATCTGTTCATGAAGCGTGTCCAGGAGAACGGGGAGTGG 64268 Query 104765 TCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAA 104824 ||||| | || || || || || || ||| | || | | ||||| |||||||| Sbjct 64269 ACTCTCATGTGCCCCAACGAGTGCCCCGGCCTCGCTGACGTCTACGGTGATGAGTTTGAG 64328 Query 104825 GCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGAC-TGCGACGGTGCCAGCTGCCGA 104883 || || ||| | ||||| |||| || | | | | || || || | || | || Sbjct 64329 GCTCTGTACGAGAGCTACGA-GAAGCAGAACAAGGGCCGTGAAACTGTCCGCGC-CCAGA 64386 Query 104884 TG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACA 104942 | ||||| | || || ||| | | || ||||| ||||||| || | ||||| |||| Sbjct 64387 AGCTGTGGTACGCCATCCTCGAAGCCCAGACCGAAACTGGTAACCCCTTTATGCTCTACA 64446 Query 104943 AAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATC 105002 | || || || |||| ||||| || || ||||| ||||| ||| || ||||| | Sbjct 64447 AGGATGCTTGCAACCGTAAGAGCAACCAGAAGAACTTGGGCACTATCCGTAGCTCCAACC 64506 Query 105003 TCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCAT 105062 | || || || || | || | || | | |||||| ||||| || || || || | Sbjct 64507 TGTGCACGGAGATTGTCGAGTACACTGCCCCTGATGAGGTTGCTGTTTGCAATCTTGCTT 64566 Query 105063 CAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACA-TTTGATTATGAAAAACTC 105121 | | || || ||| | ||| || | | | | | | ||||| | | || || Sbjct 64567 CTCTTGCCCTGCCCTCTTTTGTTGA-CTACAAGCGTGGCGAGTTTGACTTCCAGAAGCTT 64625 Query 105122 CACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTAC 105181 ||||| || || | ||||||| ||| | |||| | ||||| || ||| Sbjct 64626 CACGAGGTCACCCAGGTTGTCACCCGCAACTTGAACAAGATCATTGAAGTCAACCACTAC 64685 Query 105182 CCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAG 105241 ||||||||| || || || | | ||||| || || ||| | || || || Sbjct 64686 CCCGTTGAGGAGGCACGCCGCAGCAACTTCCGTCACCGACCTATCGGTATGGGCGTACAA 64745 Query 105242 GGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGA 105300 ||||| || |||| ||| | | ||| |||| | || || || | || || ||| | Sbjct 64746 GGTCTGGCCGATGCTTTCCTCGCATTG-CGCCTGCCTTTCGAGTCGGCAGAGGCCAAGAA 64804 Query 105301 AATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTT 105360 |||| | || || |||||||| || ||||| |||||| | | || | Sbjct 64805 GCTCAACATCCAGATCTTCGAGACCATCTACCACGCTGCTCTTACTTCTTCCTGCGACAT 64864 Query 105361 GGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCT 105420 || ||| |||||||||||| |||| ||||| ||||| | ||| || || || Sbjct 64865 TGCCAAGGAGCTTGGTCCATATGAGACCTACGAGGGATCTCCCGTTTCTCAGGGAACCCT 64924 Query 105421 TCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCACTACGACTGGGAAGCTCTCAAGG 105479 ||| | ||||||| |||| || | || | | | || ||||||| || | |||| Sbjct 64925 TCAGTACGATATGT-GGAACGTCACCCCCACCGACCTCTGGGACTGGGCAGAGTTGAAGG 64983 Query 105480 AACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCT 105539 || | | ||| | || ||| | | | || ||||| |||||||| |||| Sbjct 64984 CCAAGATTGCTCAACATGGTGTACGCAACTCTTTGTTGATCGCTCCCATGCCAACTGCCT 65043 Query 105540 CCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTA-T 105598 | ||| | || || | || || || |||||||| || || ||||| | |||||||| | Sbjct 65044 CGACCTCCCAGATTCTCGGAAACAACGAATGCTTCGAGCCGTACACATCTAACATCTACT 65103 Query 105599 CTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCAT--CTCGTGGATGACC 105656 || || | |||||||| ||||| | |||||||| ||| || | | || | Sbjct 65104 CT-CGACGTGTGCTCGCGGGTGAGTTCCAGGTTGTCAAC--CCATGGCTGCTCAAGGATC 65160 Query 105657 TCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTT 105716 || || || || || ||||| || | |||||| | | ||| | | |||||||| Sbjct 65161 TCGTCGACATGGGCCTGTGGTCTGAGAACATGAAGAACCGCATTATTGCCGAGGGTGGTT 65220 Query 105717 CCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGTTGTACCGCACAGTTTGGG 105776 ||||| || || | || || | || | |||| | | ||| || ||||||| Sbjct 65221 CCATTGCAAGAATCCCCAACATCCCTGAGGAGACCAAGACGCTCTACAAGACCGTTTGGG 65280 Query 105777 AAATCAAG--ATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCA 105834 ||||| | ||| | ||||| | ||||| || || |||||| |||||||||| Sbjct 65281 AAATCTCGCAGCGAACCA--TCATTCAGATGGCTGCTGACCGTGGTGCTTTCATTGATC- 65337 Query 105835 AAGTCAAAGT--ATGAATCTCTTCATGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATG 105892 ||||| ||| |||| | |||| | ||||| ||| |||| || | || ||| Sbjct 65338 -AGTCACAGTCGCTGAACATTCACATGAAGGAGCCAACCATGGGCAAGATCACCTCGATG 65396 Query 105893 CACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCTCCGATCTAAGGCA 105952 ||| | | | |||||| |||||||| || || ||||| |||||||| | | ||| Sbjct 65397 CACTTTGCCGGATGGAAGCTTGGTCTCAAGACCGGCATGTACTACCTCCGCACCATGGC- 65455 Query 105953 AAGGCGC-GC-CCAATTCAGTTCA 105974 | | | || ||||||||||||| Sbjct 65456 -CGCCTCTGCTCCAATTCAGTTCA 65478 >seq1363 Length=52244 Score = 113 bits (124), Expect = 5e-20 Identities = 152/208 (73%), Gaps = 8/208 (4%) Strand=Plus/Plus Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT---TGATACAAAGTC 94790 |||||| || || | ||||| || || |||||| || ||| | ||| | || || Sbjct 38373 AGTTCCCTGCATCCGCAAGAAGGCCGACTGGGCTCTGCGATGGATCTCTGACAAGAACTC 38432 Query 94791 GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 94850 ||||||| | || ||| | ||||| || || ||||||||||||||| ||| Sbjct 38433 CA---CCTTTGCCAACCGTCTCGTTGCATTCGCTGCCGTCGAGGGTATCTTCTTCAGTGG 38489 Query 94851 TTCCTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 94909 || || ||| | || | |||||||||||||| ||||| ||||| ||||| |||| Sbjct 38490 ATCATT-TGCATCCATCTTCTGGCTCAAGAAGCGTGGTCTGATGCCTGGTCTTACTTTCT 38548 Query 94910 CCAACGAGCTTATCTCTCGTGACGAGGG 94937 |||||||||| ||||||||||||||||| Sbjct 38549 CCAACGAGCTCATCTCTCGTGACGAGGG 38576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583248843153600