Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bipolaris_20oryzae_20[genbank_20GCA_5F001675385.1_202016-06-22] 1,640 sequences; 31,674,030 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq1500 89.7 3e-13 >seq1500 Length=44508 Score = 89.7 bits (98), Expect = 3e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| || || ||||| || || ||||| ||| | || || || || | Sbjct 4914 ATGCAAATCTTCGTCAAGACTCTCACCGGCAAGACGATTACTTTGGAGGTGGAATCAAGC 4855 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||| | |||| || ||| ||||| || ||| | || || || || Sbjct 4854 GATACCATTGACAACGTAAAGGCGAAGATTCAGGACAAGGAGGGTATCCCTCCTGACCAG 4795 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || ||||| || || ||||| || |||| | || | | |||||||||| Sbjct 4794 CAGCGTCTCATCTTTGCTGGTAAGCAACTTGAGGACGGCAGGACGCTTGCCGATTACAAC 4735 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || |||||||| Sbjct 4734 ATCCAGAAGGAGTCCAC 4718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338002844033120