Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bipolaris_20oryzae_20[genbank_20GCA_5F001675385.1_202016-06-22] 1,640 sequences; 31,674,030 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq1500 158 9e-34 >seq1500 Length=44508 Score = 158 bits (174), Expect = 9e-34 Identities = 161/210 (77%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| ||| |||||| |||||| ||||||||||||||||| || | |||| || Sbjct 4705 CACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAATCGGCAAGCGTCCTGCCGTCCTC 4764 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || ||||| || |||||||| | ||||||||| || | ||| | ||| ||||| ||| Sbjct 4765 AAGTTGCTTACCAGCAAAGATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTG 4824 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 |||||| ||| | | | ||||| ||| ||||||||||||| ||||||||||| Sbjct 4825 AATCTTCGCCTTTACGTTGTCAATGGTATCGCTTGATTCCACCTCCAAAGTAATCGTCTT 4884 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| ||||| |||||||||||||| Sbjct 4885 GCCGGTGAGAGTCTTGACGAAGATTTGCAT 4914 Score = 120 bits (132), Expect = 2e-22 Identities = 141/189 (75%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || ||| ||||| || |||||||| ||||| || ||| |||| || Sbjct 5446 ACAAGGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCGGCAAGGGTGCGGCCGTCCTCA 5505 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||||||||||||||| |||| || | || ||||| ||| Sbjct 5506 AGCTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCCTGA 5565 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 |||||| ||| || ||| | |||||||||| ||| || ||||| | || || |||| Sbjct 5566 ATCTTCGCCTTGACATTGT--CGATGGTGTCGGAGGACTCAACCTCGAGGGTGATGGTCT 5623 Query 44307 TTCCCGTGA 44315 | || |||| Sbjct 5624 TGCCGGTGA 5632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359983204691880