Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq426 140 7e-28
seq587 89.7 1e-12
>seq426
Length=8128
Score = 140 bits (154), Expect = 7e-28
Identities = 176/238 (74%), Gaps = 4/238 (2%)
Strand=Plus/Plus
Query 230414 AGGAGTTCATTTGTGACGCTATTCCATGTCGC-CTTATTGGCATGAACGCTGAACTTATG 230472
|||||||| | | || || | ||| ||||| ||| | || |||||||| | || |||
Sbjct 5103 AGGAGTTCCTCTCAGATGCGCTCCCA-GTCGCGCTTCTCGGAATGAACGCCAAGCTCATG 5161
Query 230473 GGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTG 230532
| || |||||||| || || || |||||| | | |||||| | || || |||||||
Sbjct 5162 TGTCAATACATCGAGTTTGTCGCTGACCGCCTCCTCGTTGCATTGGGCAACAAGAAAGTC 5221
Query 230533 TACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAAC 230592
|||||||| | |||||| |||| || ||||| ||| ||||| || |||||||||
Sbjct 5222 TACAACTCCACGAACCCATTTGACTTCATGGACAACATCTCGCTAGCTGGCAAGACCAAC 5281
Query 230593 TTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG--AAGCCCGAAGA 230648
||||| || |||||||| | ||||| |||| | | ||||||||| |||| | ||||
Sbjct 5282 TTCTTTGAGAAGCGTGTTGGCGACTACCAGAAGGCCGGTGTGATGGCAAGCACCAAGA 5339
>seq587
Length=7355
Score = 89.7 bits (98), Expect = 1e-12
Identities = 94/121 (78%), Gaps = 2/121 (2%)
Strand=Plus/Minus
Query 319821 GTGTTCCACGTAAGCA-GTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGGCCGT 319879
||| |||||| ||||| || |||||||||||| | ||||||||||| |||| || |
Sbjct 2192 GTGCTCCACG-AAGCATGTCTTCAAAACATCCTTGGGAGGGAACCCTTCCAGCTTTCCTT 2134
Query 319880 TCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAGC 319939
| ||||| |||||| ||||| ||||| ||||| ||||| |||| || || ||||| |
Sbjct 2133 CCGCAATACTGCGCATGAGGGTGGATTTTCCCGCTCCGTTGCGCCCGCAGAGCCCGTATC 2074
Query 319940 G 319940
|
Sbjct 2073 G 2073
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057771575564840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |