Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq295 196 6e-45 >seq295 Length=8791 Score = 196 bits (216), Expect = 6e-45 Identities = 477/721 (66%), Gaps = 4/721 (1%) Strand=Plus/Minus Query 53951 TCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 54010 |||||||| || || | |||| |||| || || ||||| || || | | | | Sbjct 1915 TCAAACTCTTCGCCATAGACATCTGCCAAGCCTGGCGCTTCATTGGGGCAAAAGAGAGTC 1856 Query 54011 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 54070 ||||| || | | || || || ||||| || ||||| || |||| ||||| | ||| Sbjct 1855 CACTCGCCATTCTTCTCAACACGCTTCATGAACAGATCGGGCGTCCAGAGAGCAAGAAAG 1796 Query 54071 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 54130 ||||||| || | | ||| || || || ||||| || || | ||| | | Sbjct 1795 AGATCTCGGGCGCGAACTTCTTCCTTACCATGGTTCTTACGGAGGTCCAAAAACTCAAAG 1736 Query 54131 ATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCC 54190 ||||| | |||||||| || | || || | | | |||| ||||| ||||| |||||| Sbjct 1735 ATATCGGTGTGCCACGGCTCGAGATAAATAGCGAAAGCTCCTGGCCGCTTGTTACCTCCC 1676 Query 54191 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 54250 ||||| | ||||||||||| || || |||| | | ||| |||| ||| ||||| || Sbjct 1675 TGATCGACATATCTAGCGGTATTGTTGAAAACGCGGAGCATGGGAACAATTCCATTTGAG 1616 Query 54251 GCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 54310 | |||||| || || | || || ||| | ||||||| ||| ||||| Sbjct 1615 GAACCATTCGTTCCCGCAATGTAAGAGCCAGTACCACGAATGCGGTGAATGTTGAGACCA 1556 Query 54311 ATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCT 54370 || || || || | || || || || || || ||| ||||| || || || ||||| Sbjct 1555 ATACCACCAGCAGTCTTTGAAATCAAAGCACAAGTTTTCAACGTGTCGTAAATACCCTCG 1496 Query 54371 ATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 54430 ||||| || ||| |||| | | ||||| || || ||| || | | || || Sbjct 1495 ATACTGTCTTCCTTCATATCGATGAGAAAGCAAGAAGCCATCTGAGGTTGGGGGGTACCA 1436 Query 54431 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 54490 ||||| || | || ||||||||||| || || |||| | || | ||||| || ||| Sbjct 1435 GCATTGAAGAGTGTGGGAGAAGCGTGAGTGAAAAATTTCTGGGACATGAGATTATAGGTC 1376 Query 54491 TCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGC 54550 ||||| || |||| ||| ||||||||| || || |||||||| | |||||| Sbjct 1375 TCGATGACTTTCTCTACATCATCCCCATGAATTCCAACAGCAACACGCATGATCATGTGT 1316 Query 54551 TGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTA 54610 || || | |||| | | |||| || ||| |||| || || |||| ||||| Sbjct 1315 TGCGGGCGTTCAGCAACCTTGCCATTGATTCGAAGCAGATAAGACCGCTCCAGGGTTTTG 1256 Query 54611 AAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTAT 54668 || || || || | ||| ||||| || || || || | ||| | ||||| | || || Sbjct 1255 AATCCGAAGTATTGGTAGTTGAAA--TCACGATCATAGACAATGGCAGAGTTAAATTCAT 1198 Query 54669 C 54669 | Sbjct 1197 C 1197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593692893560640