Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq1161 100 2e-16 >seq1161 Length=5408 Score = 100 bits (110), Expect = 2e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || || || | ||| |||| || | ||| |||||||| ||||| || || || | Sbjct 4469 TTCCTCCACGGAGACGGAGAACCAAGTGAAGAGTAGACTCCTTCTGAATATTGTAATCAG 4528 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 || || || |||| |||||||| || || || ||||||| | |||||||| | Sbjct 4529 AAAGAGTACGGCCGTCTTCCAGCTGCTTTCCAGCGAAAATAAGACGTTGCTGGTCGGGAG 4588 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | |||||||||||| ||||| || ||| | ||| ||||||||| | ||| Sbjct 4589 GGATGCCTTCCTTGTCTTGAATCTTAGACTTAACCGCGTCGATAGTATCACCTGACTCAA 4648 Query 21127 TTTCCACGGTAATGGTCTTGCCGGT 21151 || | || |||||||||||||| Sbjct 4649 CCTCGAGAGTGATGGTCTTGCCGGT 4673 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || || || | || || | ||| | ||| || ||||| ||||| ||||| || | Sbjct 4161 TTCCACCACGGAGACGAAGGACAAGATGGAGAGTCGATTCCTTCTGAATATTATAATCAG 4220 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 || ||| || | || |||||||| || |||||| | || || | ||||| || | Sbjct 4221 ACAAGGTGCGGCCATCTTCCAGCTGCTTTCCCGCAAAGATCAGACGTTGCTGATCTGGTG 4280 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | ||| |||||||| ||| || || || | | | | |||||| | ||| Sbjct 4281 GGATGCCCTCCTTGTCCTGGATTTTACTCTTTACATTGTCAATGGTATCAGAAGATTCCA 4340 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| |||||||||||||| |||| |||||||| | | | ||||| Sbjct 4341 CCTCCAATGTAATGGTCTTGCCAGTTAGAGTTTTGACGACTGTGTGCAT 4389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422239294173488