Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq1161 136 4e-27 seq426 136 4e-27 seq849 104 2e-17 seq602 96.9 4e-15 >seq1161 Length=5408 Score = 136 bits (150), Expect = 4e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| || || |||||||||||||| |||| || || | || Sbjct 3933 ATGCAGATTTTCGTGAAAACCCTGACCGGCAAAACCATCACACTCGAAGTTGAGAGCTCC 3874 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | |||| | ||| ||||||| || || || || || ||| | ||||| Sbjct 3873 GATACTATTGACAACG-TAAAGAGTAAAATTCAGGATAAGGAAGGGATTCCCCCAGACCA 3815 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| || || || |||||||| || | || || ||| ||||||||| Sbjct 3814 GCAGCGCCTCATCTTTGCTGGTAAGCAGCTGGAAGATGGTCGGACACTCTCCGACTACAA 3755 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||| |||||| ||| || ||| |||||||| | ||| |||| ||| Sbjct 3754 CATCCAAAAGGAGAGCACTCTCCATTTAGTGTTGAGGTTGCGGGGTGGC 3706 Score = 107 bits (118), Expect = 2e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| || || || || |||||||| |||||| | || ||||| | | Sbjct 4162 AATGCAGATCTTCGTTAAGACACTGACCGGCAAAACTATCACCCTGGAAGTCGAGAGCTC 4103 Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 || | | | | |||| | || | |||| | | ||||||||||| ||||| | |||| Sbjct 4102 AGATACCATTGATAACGTTAAAAGCAAAA-TCCAAGACAAAGAGGGTATCCCACCAGACC 4044 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 ||||||||||||||| ||| || ||||| || || || | || || || || || | Sbjct 4043 AGCAACGACTCATCTTCGCCGGAAAACAACTTGAGGATGGCCGGACACTTTCGGATTATA 3984 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 | ||||| ||||| |||| || || || || Sbjct 3983 ATATCCAAAAGGAATCCACACTCCACCTTGT 3953 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| | | |||| ||||| || || ||||| ||||| || | || || ||| | | Sbjct 4389 ATGCACACAGTCGTCAAAACTCTAACTGGCAAGACCATTACATTGGAGGTGGAATCTTCT 4330 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | | ||| ||||| | ||||| ||||||||||| | || ||| Sbjct 4329 GATACCATTGACAATGTAAAGAGTAAAATCCAGGACAAGGAGGGCATCCCACCAGATCAG 4270 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| || |||| ||||| || |||||||| || | |||||| | || || || Sbjct 4269 CAACGTCTGATCTTTGCGGGAAAGCAGCTGGAAGATGGCCGCACCTTGTCTGATTATAAT 4210 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 || |||||||| | || || ||||| || Sbjct 4209 ATTCAGAAGGAATCGACTCTCCATCTTGT 4181 >seq426 Length=8128 Score = 136 bits (150), Expect = 4e-27 Identities = 203/285 (71%), Gaps = 5/285 (2%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| ||||| || || || |||||||| |||||||| | || || | || || Sbjct 4403 ATCTGGCAAATGTATAAGAAAGCGGAGGCGTCATTCTGGACTGCAGAAGAAATTGATCTC 4462 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGC---TTGAACGACAACGAGCGCCATTTCATCAAG 116752 || || || ||| ||| | | ||||||||| | ||||| |||| ||| Sbjct 4463 TCGAAAGATCTTCACGATTGGAACAACAGATTGAACGACGATGAGCGATATTTTATCTCC 4522 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 || || |||| |||||||||||| || ||||| ||||||||||| |||||||||||| Sbjct 4523 CATGTCTTGGCATTTTTCGCCGCCTCGGATGGCATTGTCAACGAGAACCTGGTCGAGCGT 4582 Query 116813 TTCGCTCAG-GAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 || ||| || || ||||| | ||||| || |||||||| ||||| |||||| || Sbjct 4583 TT-TAGCAGTGAAGTTCAGGTACCTGAGGCTCGCTGCTTCTATGGCTTCCAGATCATGAT 4641 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTA 116916 ||| || | ||||| || | || || ||| |||||||| || Sbjct 4642 GGAAAATATTCACTCCGAGACTTACTCCCTCCTAATCGACACATA 4686 Score = 132 bits (146), Expect = 5e-26 Identities = 305/453 (67%), Gaps = 10/453 (2%) Strand=Plus/Plus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 ||||||| || ||||| | || ||||| | | | ||| | ||| | |||||| Sbjct 4815 AGAAGGCTGATTGGGCCATCCGGTGGATTGAGGATAAAGAATCTAGCTTTGCACAGCGCC 4874 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 | || ||||||||||| || || ||| ||||||| || ||| || | || || | Sbjct 4875 TCGTCGCCTTCGCGGCTGTTGAAGGCATCTTCTTCAGTGGATCTTTTGCTTCTATCTTCT 4934 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 ||||||||||||| ||||||||||| || || || || |||||||| ||||| | | Sbjct 4935 GGCTCAAGAAACGAGGCCTCATGCCTGGGCTTACATTTTCTAACGAGCTTATCTCTCGTG 4994 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221 ||||||| |||| || || |||||| | || ||| || | || || || | Sbjct 4995 ACGAGGGCTTGCACACTGATTTCGCCTGTCTTCTCTTCTCCCACCTCCGCCACCGCCCCA 5054 Query 117222 GCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCA 117281 | | | | || | |||| |||| || || ||| | || |||||| |||||| Sbjct 5055 CCCCAGAGGCTGTTGAGAGGATCATCACTGAGGCCGTCACGATAGAGCAGGAGTTCCTCT 5114 Query 117282 CCGAAGCGCTGCCGGT-GCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACAT 117339 | || ||||| || || ||| || || ||| | || || || | |||| |||||||| Sbjct 5115 CAGATGCGCTCCCAGTCGCG-CTTCTCGGAATGAA-CGCCAAGCTCATGTGTCAATACAT 5172 Query 117340 CGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCA---CTACAACAC 117396 |||||| ||||| ||| | || || | | || ||| |||| | ||||||| | Sbjct 5173 CGAGTTTGTCGCTGACCGCCTCCTCGTTGCATTG---GGCAACAAGAAAGTCTACAACTC 5229 Query 117397 GCCCAACCCGCTGGACTTTATGAACCTCATCTC 117429 | ||||| | ||||| ||| || |||||| Sbjct 5230 CACGAACCCATTTGACTTCATGGACAACATCTC 5262 >seq849 Length=6452 Score = 104 bits (114), Expect = 2e-17 Identities = 143/199 (72%), Gaps = 1/199 (1%) Strand=Plus/Minus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 ||||| | | | ||||| || || || |||||||| |||||||| | || ||||| | Sbjct 1835 AAAAACGAACAGCTTCGTCAAGACCCTAACGGGCAAGACCATCACTCTTGAGGTCGAGTC 1776 Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 || ||||| | | | | ||||| ||||| | ||||| ||||| ||||| | || Sbjct 1775 CAGCGACACCATCGACAATGTCAAGAGCAAAATCCAGGACAAGGAGGGAATCCCACCCGA 1716 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 ||||||||| | |||| || ||||| ||||| || |||| || || || | || || Sbjct 1715 CCAGCAACGGTTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCCGGACGCTTAGTGATTA 1656 Query 40866 CAACATCCAGAAGG-AGGC 40883 ||||| ||||||| |||| Sbjct 1655 TAACATTCAGAAGGTAGGC 1637 >seq602 Length=25977 Score = 96.9 bits (106), Expect = 4e-15 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| ||||| |||||| | ||||||||||| || |||| ||| ||||| ||||| || Sbjct 8055 GACAAGGAGGGAATCCCCCCCGACCAGCAACGCCTGATCTTCGCCGGCAAGCAGCTCGAG 7996 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 || | ||||| || ||||||||||||||||||||| | || || || || || Sbjct 7995 GATGGCCGCACTCTTTCTGACTACAACATCCAGAAGGAGTCGACCCTTCACCTCGT 7940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515194289151680