Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq1161 136 4e-27
seq426 136 4e-27
seq849 104 2e-17
seq602 96.9 4e-15
>seq1161
Length=5408
Score = 136 bits (150), Expect = 4e-27
Identities = 169/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| ||||| || || |||||||||||||| |||| || || | ||
Sbjct 3933 ATGCAGATTTTCGTGAAAACCCTGACCGGCAAAACCATCACACTCGAAGTTGAGAGCTCC 3874
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | |||| | ||| ||||||| || || || || || ||| | |||||
Sbjct 3873 GATACTATTGACAACG-TAAAGAGTAAAATTCAGGATAAGGAAGGGATTCCCCCAGACCA 3815
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || ||||||| || || || |||||||| || | || || ||| |||||||||
Sbjct 3814 GCAGCGCCTCATCTTTGCTGGTAAGCAGCTGGAAGATGGTCGGACACTCTCCGACTACAA 3755
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
|||||| |||||| ||| || ||| |||||||| | ||| |||| |||
Sbjct 3754 CATCCAAAAGGAGAGCACTCTCCATTTAGTGTTGAGGTTGCGGGGTGGC 3706
Score = 107 bits (118), Expect = 2e-18
Identities = 152/211 (72%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
|||||| || ||||| || || || || |||||||| |||||| | || ||||| | |
Sbjct 4162 AATGCAGATCTTCGTTAAGACACTGACCGGCAAAACTATCACCCTGGAAGTCGAGAGCTC 4103
Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807
|| | | | | |||| | || | |||| | | ||||||||||| ||||| | ||||
Sbjct 4102 AGATACCATTGATAACGTTAAAAGCAAAA-TCCAAGACAAAGAGGGTATCCCACCAGACC 4044
Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867
||||||||||||||| ||| || ||||| || || || | || || || || || |
Sbjct 4043 AGCAACGACTCATCTTCGCCGGAAAACAACTTGAGGATGGCCGGACACTTTCGGATTATA 3984
Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
| ||||| ||||| |||| || || || ||
Sbjct 3983 ATATCCAAAAGGAATCCACACTCCACCTTGT 3953
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| | | |||| ||||| || || ||||| ||||| || | || || ||| | |
Sbjct 4389 ATGCACACAGTCGTCAAAACTCTAACTGGCAAGACCATTACATTGGAGGTGGAATCTTCT 4330
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | | | ||| ||||| | ||||| ||||||||||| | || |||
Sbjct 4329 GATACCATTGACAATGTAAAGAGTAAAATCCAGGACAAGGAGGGCATCCCACCAGATCAG 4270
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
||||| || |||| ||||| || |||||||| || | |||||| | || || ||
Sbjct 4269 CAACGTCTGATCTTTGCGGGAAAGCAGCTGGAAGATGGCCGCACCTTGTCTGATTATAAT 4210
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|| |||||||| | || || ||||| ||
Sbjct 4209 ATTCAGAAGGAATCGACTCTCCATCTTGT 4181
>seq426
Length=8128
Score = 136 bits (150), Expect = 4e-27
Identities = 203/285 (71%), Gaps = 5/285 (2%)
Strand=Plus/Plus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| ||||| || || || |||||||| |||||||| | || || | || ||
Sbjct 4403 ATCTGGCAAATGTATAAGAAAGCGGAGGCGTCATTCTGGACTGCAGAAGAAATTGATCTC 4462
Query 116696 TCCAAGGACACGAGCGACTGGGAGCGC---TTGAACGACAACGAGCGCCATTTCATCAAG 116752
|| || || ||| ||| | | ||||||||| | ||||| |||| |||
Sbjct 4463 TCGAAAGATCTTCACGATTGGAACAACAGATTGAACGACGATGAGCGATATTTTATCTCC 4522
Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812
|| || |||| |||||||||||| || ||||| ||||||||||| ||||||||||||
Sbjct 4523 CATGTCTTGGCATTTTTCGCCGCCTCGGATGGCATTGTCAACGAGAACCTGGTCGAGCGT 4582
Query 116813 TTCGCTCAG-GAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871
|| ||| || || ||||| | ||||| || |||||||| ||||| |||||| ||
Sbjct 4583 TT-TAGCAGTGAAGTTCAGGTACCTGAGGCTCGCTGCTTCTATGGCTTCCAGATCATGAT 4641
Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTA 116916
||| || | ||||| || | || || ||| |||||||| ||
Sbjct 4642 GGAAAATATTCACTCCGAGACTTACTCCCTCCTAATCGACACATA 4686
Score = 132 bits (146), Expect = 5e-26
Identities = 305/453 (67%), Gaps = 10/453 (2%)
Strand=Plus/Plus
Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041
||||||| || ||||| | || ||||| | | | ||| | ||| | ||||||
Sbjct 4815 AGAAGGCTGATTGGGCCATCCGGTGGATTGAGGATAAAGAATCTAGCTTTGCACAGCGCC 4874
Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101
| || ||||||||||| || || ||| ||||||| || ||| || | || || |
Sbjct 4875 TCGTCGCCTTCGCGGCTGTTGAAGGCATCTTCTTCAGTGGATCTTTTGCTTCTATCTTCT 4934
Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161
||||||||||||| ||||||||||| || || || || |||||||| ||||| | |
Sbjct 4935 GGCTCAAGAAACGAGGCCTCATGCCTGGGCTTACATTTTCTAACGAGCTTATCTCTCGTG 4994
Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221
||||||| |||| || || |||||| | || ||| || | || || || |
Sbjct 4995 ACGAGGGCTTGCACACTGATTTCGCCTGTCTTCTCTTCTCCCACCTCCGCCACCGCCCCA 5054
Query 117222 GCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCA 117281
| | | | || | |||| |||| || || ||| | || |||||| ||||||
Sbjct 5055 CCCCAGAGGCTGTTGAGAGGATCATCACTGAGGCCGTCACGATAGAGCAGGAGTTCCTCT 5114
Query 117282 CCGAAGCGCTGCCGGT-GCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACAT 117339
| || ||||| || || ||| || || ||| | || || || | |||| ||||||||
Sbjct 5115 CAGATGCGCTCCCAGTCGCG-CTTCTCGGAATGAA-CGCCAAGCTCATGTGTCAATACAT 5172
Query 117340 CGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCA---CTACAACAC 117396
|||||| ||||| ||| | || || | | || ||| |||| | ||||||| |
Sbjct 5173 CGAGTTTGTCGCTGACCGCCTCCTCGTTGCATTG---GGCAACAAGAAAGTCTACAACTC 5229
Query 117397 GCCCAACCCGCTGGACTTTATGAACCTCATCTC 117429
| ||||| | ||||| ||| || ||||||
Sbjct 5230 CACGAACCCATTTGACTTCATGGACAACATCTC 5262
>seq849
Length=6452
Score = 104 bits (114), Expect = 2e-17
Identities = 143/199 (72%), Gaps = 1/199 (1%)
Strand=Plus/Minus
Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745
||||| | | | ||||| || || || |||||||| |||||||| | || ||||| |
Sbjct 1835 AAAAACGAACAGCTTCGTCAAGACCCTAACGGGCAAGACCATCACTCTTGAGGTCGAGTC 1776
Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805
|| ||||| | | | | ||||| ||||| | ||||| ||||| ||||| | ||
Sbjct 1775 CAGCGACACCATCGACAATGTCAAGAGCAAAATCCAGGACAAGGAGGGAATCCCACCCGA 1716
Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865
||||||||| | |||| || ||||| ||||| || |||| || || || | || ||
Sbjct 1715 CCAGCAACGGTTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCCGGACGCTTAGTGATTA 1656
Query 40866 CAACATCCAGAAGG-AGGC 40883
||||| ||||||| ||||
Sbjct 1655 TAACATTCAGAAGGTAGGC 1637
>seq602
Length=25977
Score = 96.9 bits (106), Expect = 4e-15
Identities = 91/116 (78%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842
||||| ||||| |||||| | ||||||||||| || |||| ||| ||||| ||||| ||
Sbjct 8055 GACAAGGAGGGAATCCCCCCCGACCAGCAACGCCTGATCTTCGCCGGCAAGCAGCTCGAG 7996
Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|| | ||||| || ||||||||||||||||||||| | || || || || ||
Sbjct 7995 GATGGCCGCACTCTTTCTGACTACAACATCCAGAAGGAGTCGACCCTTCACCTCGT 7940
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515194289151680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |