Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq1161 125 6e-24
seq602 86.0 5e-12
>seq1161
Length=5408
Score = 125 bits (138), Expect = 6e-24
Identities = 150/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| ||| || || ||||| || || ||||| | || || |||||| || ||
Sbjct 3958 GTGGAGTGTGGATTCCTTTTGGATATTATAATCCGAAAGTGTCCGGCCATCCTCAAGTTG 4017
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|||||| ||| ||||||| || ||||| || || || || ||||| |||||| |||||
Sbjct 4018 TTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACCCTCTTTGTCTTGGATTTT 4077
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|||||| | || | ||| || | ||||||||| || | ||| | |||||||||||
Sbjct 4078 GCTTTTAACGTTATCAATGGTATCTGAGCTCTCGACTTCCAGGGTGATAGTTTTGCCGGT 4137
Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738
||| || || || || ||||||||
Sbjct 4138 CAGTGTCTTAACGAAGATCTGCAT 4161
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
|| || || || |||||||| || |||| || ||| ||||| |||||||| |||
Sbjct 3707 CCACCCCGCAACCTCAACACTAAATGGAGAGTGCTCTCCTTTTGGATGTTGTAGTCGGAG 3766
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| || || ||| || ||||| || ||||| ||||||| |||||||| || || ||
Sbjct 3767 AGTGTCCGACCATCTTCCAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGGGGA 3826
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691
|| || ||||| || |||||| || || | || | || || | |||||| ||
Sbjct 3827 ATCCCTTCCTTATCCTGAATTTTACTCTTTACGTTGTCAATAGTATCGGAGCTCTCAACT 3886
Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| || | |||||||||||||| ||||| || |||||||||||
Sbjct 3887 TCGAGTGTGATGGTTTTGCCGGTCAGGGTTTTCACGAAAATCTGCAT 3933
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/197 (71%), Gaps = 3/197 (2%)
Strand=Plus/Plus
Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590
|||| |||| || || || || ||||| || ||||| || ||||| ||| || |
Sbjct 4182 CAAGATGGAGAGTCGATTCCTTCTGAATATTATAATCAGACAAGGTGCGGCCATCTTCCA 4241
Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGTA 118649
|||| ||||| || |||| ||||| |||||||| || || ||||||||||||| ||| |
Sbjct 4242 GCTGCTTTCCCGCAAAGATCAGACGTTGCTGATCTGGTGGGATGCCCTCCTTGTCCTGGA 4301
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
||| | ||| || | || | ||| || | || ||||| | || | || |||
Sbjct 4302 TTTTACTCTTT-ACATTGTCAATGGTATCAGAAGATTCCACCTCCAATGTAATGGTCTTG 4360
Query 118710 CCGGTCAGAGTTTTTAC 118726
|| || |||||||| ||
Sbjct 4361 CCAGTTAGAGTTTTGAC 4377
>seq602
Length=25977
Score = 86.0 bits (94), Expect = 5e-12
Identities = 83/107 (78%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || || |||||||| || | |||||| |||||||||||| || ||
Sbjct 7952 GTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCG 8011
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||| |||| || || ||||| ||||| || || ||||||||||||||
Sbjct 8012 GCGAAGATCAGGCGTTGCTGGTCGGGGGGGATTCCCTCCTTGTCTGT 8058
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433809948692656
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |