Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq1161 114 1e-20
seq849 107 2e-18
>seq1161
Length=5408
Score = 114 bits (126), Expect = 1e-20
Identities = 170/237 (72%), Gaps = 8/237 (3%)
Strand=Plus/Plus
Query 42951 TATTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAA 43010
||||| || || | || | |||||| ||||| | |||||||||||||| || |||||
Sbjct 3701 TATTGGCCACCCCGCAACCTCAACACTAAATGGAGAGTGCTCTCCTTTTGGATGTTGTAG 3760
Query 43011 TCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCG 43070
|| | || ||||| | || || |||||||||||||| || ||||| |||||||||||
Sbjct 3761 TCGGAGAGTGTCCGACCATCTTCCAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCT 3820
Query 43071 GCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCT 43126
| || | | ||||| ||| ||| |||| | | ||| | | | || || |||
Sbjct 3821 GGGGGAATCCCTTCCTTATCC-TGAATTTTACTCTTTACGTTGTCAATAGTATCGGAGCT 3879
Query 43127 CGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
| || || |||| |||||||||||||| || || || || || || || |||||
Sbjct 3880 C---TCAACTTCGAGTGTGATGGTTTTGCCGGTCAGGGTTTTCACGAAAATCTGCAT 3933
Score = 100 bits (110), Expect = 3e-16
Identities = 148/207 (71%), Gaps = 6/207 (3%)
Strand=Plus/Plus
Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015
|||||| | | ||| | ||||| || | || |||||| ||||||||||||||||
Sbjct 4470 TCCTCCACGGAGACGGAGAACCAAGTGAAGAGTAGACTCCTTCTGAATATTGTAATCAGA 4529
Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075
||||| || |||| || |||||||| |||||||| || || || |||||||||| ||
Sbjct 4530 AAGAGTACGGCCGTCTTCCAGCTGCTTTCCAGCGAAAATAAGACGTTGCTGGTCGGGAGG 4589
Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGA---GCGTCGCCACCGTGTCGCTCGATTC 43132
| || ||||||| | ||| | || | | | |||||| | || || | || ||
Sbjct 4590 GATGCCTTCCTTGT-CTTGAATCTTAGACTTAACCGCGTCG--ATAGTATCACCTGACTC 4646
Query 43133 CACATCGACCGTGATGGTTTTGCCCGT 43159
|| |||| |||||||| ||||| ||
Sbjct 4647 AACCTCGAGAGTGATGGTCTTGCCGGT 4673
>seq849
Length=6452
Score = 107 bits (118), Expect = 2e-18
Identities = 140/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053
|||| ||||| || |||||| || ||||| |||| || |||||||| || || || |
Sbjct 1642 CCTTCTGAATGTTATAATCACTAAGCGTCCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGA 1701
Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113
| | || |||||||||| || | | |||||||||| |||||| |||| |
Sbjct 1702 TCAACCGTTGCTGGTCGGGTGGGATTCCCTCCTTGTCCTGGATTTTGCTCTTGACATTGT 1761
Query 43114 CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAA 43173
| | |||||||| || || || || | |||||||| ||||||||||| ||||| || |
Sbjct 1762 CGATGGTGTCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTTAGGGTCTTGACGA 1821
Query 43174 AGATTTGCATTTTT 43187
|| | | | |||||
Sbjct 1822 AGCTGTTCGTTTTT 1835
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571789952619040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |