Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq1161 87.8 1e-12 seq849 86.0 5e-12 >seq1161 Length=5408 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 45106 TTCGCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC 45165 || |||||| | ||| || || || || || || ||||||||||| || ||||||||||| Sbjct 3703 TTGGCCACCCCGCAACCTCAACACTAAATGGAGAGTGCTCTCCTTTTGGATGTTGTAGTC 3762 Query 45166 GTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGG 45225 | ||| ||| | || ||||| || || || || || || | ||||| ||||| || Sbjct 3763 GGAGAGTGTCCGACCATCTTCCAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGG 3822 Query 45226 AGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTC 45285 || | || ||||| ||| |||||| ||| || | | | || | ||| Sbjct 3823 GGGAATCCCTTCCTTATCCTGAATTTTACTCTTTACGTTGTCAATAGTATCGGAGCTCTC 3882 Query 45286 CACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || | || || || ||||| ||||| || ||||| || || ||||| Sbjct 3883 AACTTCGAGTGTGATGGTTTTGCCGGTCAGGGTTTTCACGAAAATCTGCAT 3933 Score = 82.4 bits (90), Expect = 6e-11 Identities = 129/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || || |||||||||||| ||||| || || || |||| ||| Sbjct 4489 ACCAAGTGAAGAGTAGACTCCTTCTGAATATTGTAATCAGAAAGAGTACGGCCGTCTTCC 4548 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || ||||| ||||| || | || || ||||||||||| | || |||||||| | Sbjct 4549 AGCTGCTTTCCAGCGAAAATAAGACGTTGCTGGTCGGGAGGGATGCCTTCCTTGTCTTGA 4608 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||||||||| | | | || || ||| ||||| | || || |||||| Sbjct 4609 ATCTTAGACTTAACCGCGTCGATAGTATCACCTGACTCAACCTCGAGAGTGATGGTCTTG 4668 Query 45308 CCCGT 45312 || || Sbjct 4669 CCGGT 4673 >seq849 Length=6452 Score = 86.0 bits (94), Expect = 5e-12 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 45147 CCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATA 45206 ||||||||||||| || || | || || |||| || || || || ||||| || | Sbjct 1642 CCTTCTGAATGTTATAATCACTAAGCGTCCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGA 1701 Query 45207 TCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCG 45266 ||||||| || |||||||| || | |||||||||||| ||||| ||| || Sbjct 1702 TCAACCGTTGCTGGTCGGGTGGGATTCCCTCCTTGTCCTGGATTTTGCTCTTGACATTGT 1761 Query 45267 CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAA 45326 | | | |||| | ||| ||||| | || || ||||||||||| || ||||| || | Sbjct 1762 CGATGGTGTCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTTAGGGTCTTGACGA 1821 Query 45327 AG 45328 || Sbjct 1822 AG 1823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395056575661228