Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq295 194 1e-44
seq1161 98.7 9e-16
seq426 98.7 9e-16
>seq295
Length=8791
Score = 194 bits (214), Expect = 1e-44
Identities = 493/739 (67%), Gaps = 16/739 (2%)
Strand=Plus/Minus
Query 23249 TACTTTTGGTACAACGCGTCAAATTCGGCACCGTA-ACAGTCGGCCAGGCCGGGCGATTG 23307
||||||| ||| | ||| ||||| || | || || ||| || |||| ||| |||| ||
Sbjct 1933 TACTTTTCGTAAAGCGCATCAAACTCTTCGCCATAGACA-TCTGCCAAGCCTGGCGCTTC 1875
Query 23308 CATCGGACACATGAGACTCCACATTG--AGTCATTTTCAACGCGTCTCATAAAAAGATCC 23365
| || || | |||| ||||| | | | || || ||||| || |||| || |||||
Sbjct 1874 ATTGGGGCAAAAGAGAGTCCAC-TCGCCATTC-TTCTCAACACGCTTCATGAACAGATCG 1817
Query 23366 GGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTT 23425
|| |||| ||||| || || || |||||||| || || || || || ||||||
Sbjct 1816 GGCGTCCAGAGAGCAAGAAAGAGATCTCGGGCGCGAACTTCTTCCTTACCATGGTTCTTA 1757
Query 23426 TTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCG 23485
| |||||||| || || | || | |||||||||||||| |||| || || ||
Sbjct 1756 CGGAGGTCCAAAAACTCAAAGATATCGGTGTGCCACGGCTCGAGATAAATAGCGAAAGCT 1697
Query 23486 CCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGC 23545
|| || | ||| || || ||||||||||| || | || || |||||| | || | |||
Sbjct 1696 CCTGGCCGCTTGTTACCTCCCTGATCGACATATCTAGCGGTATTGTTGAAAACGCGGAGC 1637
Query 23546 ATCGGCACGAGACCGTTGGACGCGCCGCCTACG--CCCGCCACACTCGAACCTTTTGCTC 23603
|| || || | || || || | | | | || ||||| | || || | | |
Sbjct 1636 ATGGGAACAATTCCATTTGAGGAAC--CATTCGTTCCCGCAATGTAAGAGCCAGTACCAC 1579
Query 23604 GAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTT 23663
||| | ||||| || || ||| || || || | | || || |||| || || ||
Sbjct 1578 GAATGCGGTGAATGTTGAGACCAATACCACCAGCAGTCTTTGAAATCAAAGCACAAGTTT 1519
Query 23664 TCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAG 23723
||| |||||||| || |||||||| ||||| || || | ||| | || || ||||
Sbjct 1518 TCAACGTGTCGTAAATACCCTCGATACTGTCTTCCTTCATATCGATGAGAAAGCAAGAAG 1459
Query 23724 ACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATC 23783
||| || | || ||| ||| | || ||| ||||| || ||||| || || ||
Sbjct 1458 CCATCTGAGGTTGGGGGGTACCAGCATTGAAGAGTGTGGGAGAAGCGTGAGTGAAAAATT 1399
Query 23784 CATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGA 23843
| ||||| ||||| || || |||||| | || | || || || || || || |
Sbjct 1398 TCTGGGACATGAGATTATAGGTCTCGATGACTTTCTCTACATCATCCCCATGAATTCCAA 1339
Query 23844 TGGCGACGCGCATCATCATGTATTGAGGTC--TC-TCGACCGTGACGCCGTTAATTTTGA 23900
|| || ||||| ||||||| ||| || | || | ||| | ||| || ||| |
Sbjct 1338 CAGCAACACGCATGATCATGTGTTGCGGGCGTTCAGCAACCTT---GCCATTGATTCGAA 1282
Query 23901 ACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGT 23960
|||||| || || | || ||||| ||||| || || | ||||| || |||||||| |
Sbjct 1281 GCAGATAAGACCGCTCCAGGGTTTTGAATCCGAAGTATTGGTAGTTGAAATCACGATCAT 1222
Query 23961 GCACTATGGCCGAATTCAA 23979
|| ||||| || || ||
Sbjct 1221 AGACAATGGCAGAGTTAAA 1203
>seq1161
Length=5408
Score = 98.7 bits (108), Expect = 9e-16
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| |||||||| || || ||||| |||||||| ||||| |||| ||||| |||
Sbjct 3933 ATGCAGATTTTCGTGAAAACCCTGACCGGCAAAACCATCACACTCGAAGTTGAGAGCTCC 3874
Query 31253 GACAGTGTCGAAACGGTCAAACAG-AGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|| | | | || | || ||| || | ||| ||| |||||||| | || || |||||
Sbjct 3873 GATACTATTGACAACGT-AAAGAGTAAAATTCAGGATAAGGAAGGGATTCCCCCAGACCA 3815
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||||| || || || ||||| || ||| ||||||| | ||| | ||| || ||
Sbjct 3814 GCAGCGCCTCATCTTTGCTGGTAAGCAGCTGGAAGATGGTCGGACACTCTCCGACTACAA 3755
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
||| ||||| || ||||| ||| | || | || || |||| ||
Sbjct 3754 CATCCAAAAGGAGAGCACTCTCCATTTAGTGTTGAGGTTGCGGGGTGG 3707
Score = 84.2 bits (92), Expect = 2e-11
Identities = 90/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 31286 GACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAA 31345
|||||||||||| | || ||||||||||| ||||| || |||||||| || ||| |||||
Sbjct 4604 GACAAGGAAGGCATCCCTCCCGACCAGCAACGTCTTATTTTCGCTGGAAAGCAGCTGGAA 4545
Query 31346 GACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||| ||| | ||||| || ||||| || || || |||||||| |||| ||
Sbjct 4544 GACGGCCGTACTCTTTCTGATTACAATATTCAGAAGGAGTCTACTCTTCACTTGGTTCT 4486
Score = 82.4 bits (90), Expect = 7e-11
Identities = 142/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262
|||| || ||||| || ||||| || || || | || || ||| | || || | | |
Sbjct 4379 TCGTCAAAACTCTAACTGGCAAGACCATTACATTGGAGGTGGAATCTTCTGATACCATTG 4320
Query 31263 AAACGGTCAAACAG-AGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321
| | || ||| || | ||| ||||||||| ||| | || || || ||||| |||||
Sbjct 4319 ACAATGT-AAAGAGTAAAATCCAGGACAAGGAGGGCATCCCACCAGATCAGCAACGTCTG 4261
Query 31322 ATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAA 31381
|| || || || || ||| ||||||| || || |||||||| ||||| ||
Sbjct 4260 ATCTTTGCGGGAAAGCAGCTGGAAGATGGCCGCACCTTGTCTGATTATAATATTCAGAAG 4201
Query 31382 GAATCGACTCTTCATCTGGTACTT 31405
||||||||||| ||||| || |||
Sbjct 4200 GAATCGACTCTCCATCTTGTCCTT 4177
>seq426
Length=8128
Score = 98.7 bits (108), Expect = 9e-16
Identities = 205/302 (68%), Gaps = 9/302 (3%)
Strand=Plus/Plus
Query 57553 CGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCG 57612
||||| ||||| | || ||| | ||||| || || || || || || || ||||| |
Sbjct 4390 CGATTCAATAT----AGATCTGGCAAATGTATAAGAAAGCGGAGGCGTCATTCTGGACTG 4445
Query 57613 TCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTG 57669
|||||| | || || || || ||||| ||||||| | | | || || ||
Sbjct 4446 CAGAAGAAATTGATCTCTCGAAAGATCTTCACGATTGGAACAACAGATTGAACGACGATG 4505
Query 57670 AGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACG 57729
|| || ||||||| || || ||||| ||||||||||| || ||||| ||||| ||||
Sbjct 4506 AGCGATATTTTATCTCCCATGTCTTGGCATTTTTCGCCGCCTCGGATGGCATTGTCAACG 4565
Query 57730 AGAATTTGGTCGAAAGATTTTCACA-AGAAGTGCAAGTGACGGAGGCGAGATGCTTTTAC 57788
|||| ||||||| | |||| || ||||| || || | ||||| | ||||| ||
Sbjct 4566 AGAACCTGGTCGAGCG-TTTTAGCAGTGAAGTTCAGGTACCTGAGGCTCGCTGCTTCTAT 4624
Query 57789 GGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACG 57848
|| || || | || ||||| | || || || | || || || || ||||| ||
Sbjct 4625 GGCTTCCAGATCATGATGGAAAATATTCACTCCGAGACTTACTCCCTCCTAATCGACACA 4684
Query 57849 TA 57850
||
Sbjct 4685 TA 4686
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445744847194560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |