Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq295 178 2e-39 >seq295 Length=8791 Score = 178 bits (196), Expect = 2e-39 Identities = 473/721 (66%), Gaps = 4/721 (1%) Strand=Plus/Minus Query 65982 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 66041 || ||||| || || | |||| |||| || || ||||| || || | | | | Sbjct 1915 TCAAACTCTTCGCCATAGACATCTGCCAAGCCTGGCGCTTCATTGGGGCAAAAGAGAGTC 1856 Query 66042 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 66101 ||||| || | | || || || ||||| || ||||| || |||| ||||| | ||| Sbjct 1855 CACTCGCCATTCTTCTCAACACGCTTCATGAACAGATCGGGCGTCCAGAGAGCAAGAAAG 1796 Query 66102 AAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 66161 | ||||| || | | ||| || || || ||||| || || | ||| | | Sbjct 1795 AGATCTCGGGCGCGAACTTCTTCCTTACCATGGTTCTTACGGAGGTCCAAAAACTCAAAG 1736 Query 66162 ATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 66221 ||||| |||||||| || | || || || | | |||| ||||| ||||| |||||| Sbjct 1735 ATATCGGTGTGCCACGGCTCGAGATAAATAGCGAAAGCTCCTGGCCGCTTGTTACCTCCC 1676 Query 66222 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 66281 ||||| | ||||||||||| || || |||| | | ||| |||| ||| ||||| || Sbjct 1675 TGATCGACATATCTAGCGGTATTGTTGAAAACGCGGAGCATGGGAACAATTCCATTTGAG 1616 Query 66282 GTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCT 66341 | |||||| || || | || || ||| | ||||||| ||| ||||| Sbjct 1615 GAACCATTCGTTCCCGCAATGTAAGAGCCAGTACCACGAATGCGGTGAATGTTGAGACCA 1556 Query 66342 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCT 66401 || || || || | || || || || || || ||| ||||| || || || ||||| Sbjct 1555 ATACCACCAGCAGTCTTTGAAATCAAAGCACAAGTTTTCAACGTGTCGTAAATACCCTCG 1496 Query 66402 ATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 66461 ||||| || ||| |||| | | ||||| || || ||| || | | || || Sbjct 1495 ATACTGTCTTCCTTCATATCGATGAGAAAGCAAGAAGCCATCTGAGGTTGGGGGGTACCA 1436 Query 66462 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 66521 ||||| || | || ||||||||||| || || |||| | || | ||||| || ||| Sbjct 1435 GCATTGAAGAGTGTGGGAGAAGCGTGAGTGAAAAATTTCTGGGACATGAGATTATAGGTC 1376 Query 66522 TCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGC 66581 || || || |||| ||| ||||||||| || || |||||||| | |||||| Sbjct 1375 TCGATGACTTTCTCTACATCATCCCCATGAATTCCAACAGCAACACGCATGATCATGTGT 1316 Query 66582 TGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTA 66641 || || | |||| | | |||| || ||| | || || || |||| ||||| Sbjct 1315 TGCGGGCGTTCAGCAACCTTGCCATTGATTCGAAGCAGATAAGACCGCTCCAGGGTTTTG 1256 Query 66642 AAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTAT 66699 || || || || | ||| ||||| || || || || | ||| | ||||| | || || Sbjct 1255 AATCCGAAGTATTGGTAGTTGAAA--TCACGATCATAGACAATGGCAGAGTTAAATTCAT 1198 Query 66700 C 66700 | Sbjct 1197 C 1197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658140977345120