Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq1161 93.3 4e-14
seq849 84.2 2e-11
>seq1161
Length=5408
Score = 93.3 bits (102), Expect = 4e-14
Identities = 145/207 (70%), Gaps = 3/207 (1%)
Strand=Plus/Plus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| || || || ||||| |||||||| || |||| ||||| ||||| || ||
Sbjct 4193 GTCGATTCCTTCTGAATATTATAATCAGACAAGGTGCGGCCATCTTCCAGCTGCTTTCCC 4252
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687
||| ||||||||||||||||||| || || ||||| || ||||| |||||| |||
Sbjct 4253 GCAAAGATCAGACGTTGCTGATCTGGTGGGATGCCCTCCTTGTCCTGGATTTTACTCTTT 4312
Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747
| | || | || || | | |||||||| | || | |||||||| || | |||
Sbjct 4313 ACATTGTCAATGGTATCAGAAGATTCCACCTCCAATGTAATGGTCTTGCCAGTTAGAGTT 4372
Query 139748 TTTACGAATATTTGCATAGCTTATGTT 139774
|| |||| | | |||||| ||||||
Sbjct 4373 TTGACGACTGTGTGCATA---TATGTT 4396
Score = 89.7 bits (98), Expect = 5e-13
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || || | ||| | ||| ||||||| |||||||| || ||||| || |||||
Sbjct 4471 CCTCCACGGAGACGGAGAACCAAGTGAAGAGTAGACTCCTTCTGAATATTGTAATCAGAA 4530
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || | |||||| ||||| || ||||| | || ||||||||||| ||||||||
Sbjct 4531 AGAGTACGGCCGTCTTCCAGCTGCTTTCCAGCGAAAATAAGACGTTGCTGGTCGGGAGGG 4590
Query 139658 ATGCCTTCTTTGTC 139671
|||||||| |||||
Sbjct 4591 ATGCCTTCCTTGTC 4604
>seq849
Length=6452
Score = 84.2 bits (92), Expect = 2e-11
Identities = 126/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 139577 TTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATC 139636
|| |||||||||||||| || | || | ||| || ||||| || || ||| |||||
Sbjct 1644 TTCTGAATGTTATAATCACTAAGCGTCCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATC 1703
Query 139637 AGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCC 139696
| |||||||| ||||| || || || || ||||| |||||| || | | ||
Sbjct 1704 AACCGTTGCTGGTCGGGTGGGATTCCCTCCTTGTCCTGGATTTTGCTCTTGACATTGTCG 1763
Query 139697 ACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAA 139755
| |||||| ||| ||| ||||||| || | |||||||| || | || || |||||
Sbjct 1764 ATGGTGTCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTTAGGGTCTTGACGAA 1822
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496040015305600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |