Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq1161 93.3 4e-14 seq849 84.2 2e-11 >seq1161 Length=5408 Score = 93.3 bits (102), Expect = 4e-14 Identities = 145/207 (70%), Gaps = 3/207 (1%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || || || || ||||| |||||||| || |||| ||||| ||||| || || Sbjct 4193 GTCGATTCCTTCTGAATATTATAATCAGACAAGGTGCGGCCATCTTCCAGCTGCTTTCCC 4252 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 ||| ||||||||||||||||||| || || ||||| || ||||| |||||| ||| Sbjct 4253 GCAAAGATCAGACGTTGCTGATCTGGTGGGATGCCCTCCTTGTCCTGGATTTTACTCTTT 4312 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | || || | | |||||||| | || | |||||||| || | ||| Sbjct 4313 ACATTGTCAATGGTATCAGAAGATTCCACCTCCAATGTAATGGTCTTGCCAGTTAGAGTT 4372 Query 139748 TTTACGAATATTTGCATAGCTTATGTT 139774 || |||| | | |||||| |||||| Sbjct 4373 TTGACGACTGTGTGCATA---TATGTT 4396 Score = 89.7 bits (98), Expect = 5e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | ||| ||||||| |||||||| || ||||| || ||||| Sbjct 4471 CCTCCACGGAGACGGAGAACCAAGTGAAGAGTAGACTCCTTCTGAATATTGTAATCAGAA 4530 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | |||||| ||||| || ||||| | || ||||||||||| |||||||| Sbjct 4531 AGAGTACGGCCGTCTTCCAGCTGCTTTCCAGCGAAAATAAGACGTTGCTGGTCGGGAGGG 4590 Query 139658 ATGCCTTCTTTGTC 139671 |||||||| ||||| Sbjct 4591 ATGCCTTCCTTGTC 4604 >seq849 Length=6452 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 139577 TTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATC 139636 || |||||||||||||| || | || | ||| || ||||| || || ||| ||||| Sbjct 1644 TTCTGAATGTTATAATCACTAAGCGTCCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATC 1703 Query 139637 AGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCC 139696 | |||||||| ||||| || || || || ||||| |||||| || | | || Sbjct 1704 AACCGTTGCTGGTCGGGTGGGATTCCCTCCTTGTCCTGGATTTTGCTCTTGACATTGTCG 1763 Query 139697 ACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAA 139755 | |||||| ||| ||| ||||||| || | |||||||| || | || || ||||| Sbjct 1764 ATGGTGTCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTTAGGGTCTTGACGAA 1822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496040015305600