Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq295 185 1e-41 >seq295 Length=8791 Score = 185 bits (204), Expect = 1e-41 Identities = 548/843 (65%), Gaps = 18/843 (2%) Strand=Plus/Minus Query 79920 CCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 79979 |||||| |||| | || || || ||||| || ||||| || |||| ||||| | ||| Sbjct 1856 CCACTCGCCATTCTTCTCAACACGCTTCATGAACAGATCGGGCGTCCAGAGAGCAAGAAA 1797 Query 79980 TAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 80039 ||||||| || | | || || || || ||||| || || | ||| | | Sbjct 1796 GAGATCTCGGGCGCGAACTTCTTCCTTACCATGGTTCTTACGGAGGTCCAAAAACTCAAA 1737 Query 80040 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCC 80099 ||||| | |||||||| || | || || || | | |||| || || ||||| ||||| Sbjct 1736 GATATCGGTGTGCCACGGCTCGAGATAAATAGCGAAAGCTCCTGGCCGCTTGTTACCTCC 1677 Query 80100 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 80159 |||||| | ||||||||||| || || |||| | | ||| |||| ||| ||||| || Sbjct 1676 CTGATCGACATATCTAGCGGTATTGTTGAAAACGCGGAGCATGGGAACAATTCCATTTGA 1617 Query 80160 TGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACC 80219 | |||||| || || | || || ||| | ||||||| ||| ||||| Sbjct 1616 GGAACCATTCGTTCCCGCAATGTAAGAGCCAGTACCACGAATGCGGTGAATGTTGAGACC 1557 Query 80220 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 80279 || || || || | || || || || || || ||| ||||| || || || ||||| Sbjct 1556 AATACCACCAGCAGTCTTTGAAATCAAAGCACAAGTTTTCAACGTGTCGTAAATACCCTC 1497 Query 80280 TATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 80339 || || || || |||| | | ||||| || || ||| || | | || || Sbjct 1496 GATACTGTCTTCCTTCATATCGATGAGAAAGCAAGAAGCCATCTGAGGTTGGGGGGTACC 1437 Query 80340 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGT 80399 ||||| || | || ||||||||||| || || |||| | |||| ||||| || || Sbjct 1436 AGCATTGAAGAGTGTGGGAGAAGCGTGAGTGAAAAATTTCTGGGACATGAGATTATAGGT 1377 Query 80400 CTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTG 80459 ||| || || |||| ||| ||||||||| || || |||||||| | |||||| Sbjct 1376 CTCGATGACTTTCTCTACATCATCCCCATGAATTCCAACAGCAACACGCATGATCATGTG 1317 Query 80460 CTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTT 80519 || || | |||| | | |||| ||| ||| | || ||||| |||| ||||| Sbjct 1316 TTGCGGGCGTTCAGCAACCTTGCCATTGATTCGAAGCAGATAAGACCGCTCCAGGGTTTT 1257 Query 80520 AAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTA 80577 || || || || | ||| ||||| || || || || | ||| | ||||| | || | Sbjct 1256 GAATCCGAAGTATTGGTAGTTGAAA--TCACGATCATAGACAATGGCAGAGTTAAATTCA 1199 Query 80578 TCCTTAT-----ATT--TGTTAACTACATCCATGGTGATACTTGAAATAATCGGAGAATG 80630 || || ||| |||| ||| | | | ||| || ||||| | | | Sbjct 1198 TCTGCATGACGCATTACTGTTTCGTACGTACCCTGCGAT-------ATCATCGGGGCAGG 1146 Query 80631 TTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttt 80690 ||||| || || || | | | | || || |||||| | |||| |||| Sbjct 1145 CCGTTGGTTTTTCGGGTTGTGGTAATGGTACAGGTCATCTATCACTGAAGAAAATTGTTT 1086 Query 80691 ttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGG 80750 || |||| |||||| || || ||||| ||||| | || |||| |||||||| || || Sbjct 1085 CTTCGTTTGCTTGTGGAGGTTGGATACAGCTATCCGTGCAGCTAGGATGGCATAGTCGGG 1026 Query 80751 ATG 80753 || Sbjct 1025 GTG 1023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718234071703520