Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq1161 111 1e-19
>seq1161
Length=5408
Score = 111 bits (122), Expect = 1e-19
Identities = 167/231 (72%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941
||| || |||| || ||||| ||||||| ||||||||||||||| | ||||| |||||
Sbjct 3706 GCCACCCCGCAACCTCAACACTAAATGGAGAGTGCTCTCCTTTTGGATGTTGTAGTCGGA 3765
Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001
| ||| || | || |||| || || || ||||| || | ||||| || || | ||
Sbjct 3766 GAGTGTCCGACCATCTTCCAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGGGG 3825
Query 43002 CACACCTTCTTTTTCGCTGA--TCAACTCTTTGACTCTGCCAACTGTGTCGCCAGC-CTC 43058
| ||||| || || |||| | ||||||| || || ||| || ||| ||| |||
Sbjct 3826 AATCCCTTCCTTATC-CTGAATTTTACTCTTT-ACGTTGTCAATAGTATCG-GAGCTCTC 3882
Query 43059 GACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|| || | || || ||||| ||||| || |||||||| ||||| |||||
Sbjct 3883 AACTTCGAGTGTGATGGTTTTGCCGGTCAGGGTTTTCACGAAAATCTGCAT 3933
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381351621760344
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |