Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq295 187 3e-42 >seq295 Length=8791 Score = 187 bits (206), Expect = 3e-42 Identities = 559/858 (65%), Gaps = 6/858 (1%) Strand=Plus/Minus Query 71982 TTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATC 72041 |||||| || || | | | |||||| |||| | | || || ||||| || ||||| Sbjct 1877 TTCATTGGGGCAAAAGAGAGTCCACTCGCCATTCTTCTCAACACGCTTCATGAACAGATC 1818 Query 72042 AGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTT 72101 || |||| ||||| | ||| ||||||| || | | || || || || ||||| Sbjct 1817 GGGCGTCCAGAGAGCAAGAAAGAGATCTCGGGCGCGAACTTCTTCCTTACCATGGTTCTT 1758 Query 72102 TTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAAC 72161 || || | ||| | | ||||| | |||||||| || | || || || | | | Sbjct 1757 ACGGAGGTCCAAAAACTCAAAGATATCGGTGTGCCACGGCTCGAGATAAATAGCGAAAGC 1698 Query 72162 TCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAA 72221 ||| ||||| ||||| ||||||||||| | ||||||||||| || || |||| | | Sbjct 1697 TCCTGGCCGCTTGTTACCTCCCTGATCGACATATCTAGCGGTATTGTTGAAAACGCGGAG 1638 Query 72222 CATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACG 72281 ||| |||| ||| ||||| || | |||||| || || | || || ||| | |||| Sbjct 1637 CATGGGAACAATTCCATTTGAGGAACCATTCGTTCCCGCAATGTAAGAGCCAGTACCACG 1578 Query 72282 AATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTT 72341 ||| | ||| ||||| || || || || | || || || || || || ||| Sbjct 1577 AATGCGGTGAATGTTGAGACCAATACCACCAGCAGTCTTTGAAATCAAAGCACAAGTTTT 1518 Query 72342 TAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGA 72401 ||||| || || || ||||| ||||| || ||| |||| | | ||||| || || Sbjct 1517 CAACGTGTCGTAAATACCCTCGATACTGTCTTCCTTCATATCGATGAGAAAGCAAGAAGC 1458 Query 72402 CATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTT 72461 ||| || | | || || ||||| || | || ||||||||||| || || |||| Sbjct 1457 CATCTGAGGTTGGGGGGTACCAGCATTGAAGAGTGTGGGAGAAGCGTGAGTGAAAAATTT 1398 Query 72462 TTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTAC 72521 | |||| ||||| || ||||| || || |||| ||| ||| ||||| || Sbjct 1397 CTGGGACATGAGATTATAGGTCTCGATGACTTTCTCTACATCATCCCCATGAATTCCAAC 1338 Query 72522 CGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAA 72581 || |||||||| | ||| || || || | |||| | | |||| ||| ||| | || Sbjct 1337 AGCAACACGCATGATCATGTGTTGCGGGCGTTCAGCAACCTTGCCATTGATTCGAAGCAG 1278 Query 72582 GTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAA 72639 || || |||| ||||| || || || || | ||| ||||| || || || || Sbjct 1277 ATAAGACCGCTCCAGGGTTTTGAATCCGAAGTATTGGTAGTTGAAA--TCACGATCATAG 1220 Query 72640 ATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACT-TGA 72698 | ||| | || || | || ||| || | ||| | || || | || || Sbjct 1219 ACAATGGCAGAGTTAAATTCATCTGCATGACGCATTACTGTTTCGTACGT-ACCCTGCGA 1161 Query 72699 AATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCAC 72758 || ||||| | | | ||||| || || || | | | | || || ||||| Sbjct 1160 TATCATCGGGGCAGGCCGTTGGTTTTTCGGGTTGTGGTAATGGTACAGGTCATCTATCAC 1101 Query 72759 TTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAG 72818 | | |||| |||| || |||| |||||| || || ||||| ||||| | || ||||| Sbjct 1100 TGAAGAAAATTGTTTCTTCGTTTGCTTGTGGAGGTTGGATACAGCTATCCGTGCAGCTAG 1041 Query 72819 AATGGCATAATCTGGATG 72836 |||||||| || || || Sbjct 1040 GATGGCATAGTCGGGGTG 1023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671106750419680