Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq295 187 3e-42
>seq295
Length=8791
Score = 187 bits (206), Expect = 3e-42
Identities = 559/858 (65%), Gaps = 6/858 (1%)
Strand=Plus/Minus
Query 71982 TTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATC 72041
|||||| || || | | | |||||| |||| | | || || ||||| || |||||
Sbjct 1877 TTCATTGGGGCAAAAGAGAGTCCACTCGCCATTCTTCTCAACACGCTTCATGAACAGATC 1818
Query 72042 AGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTT 72101
|| |||| ||||| | ||| ||||||| || | | || || || || |||||
Sbjct 1817 GGGCGTCCAGAGAGCAAGAAAGAGATCTCGGGCGCGAACTTCTTCCTTACCATGGTTCTT 1758
Query 72102 TTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAAC 72161
|| || | ||| | | ||||| | |||||||| || | || || || | | |
Sbjct 1757 ACGGAGGTCCAAAAACTCAAAGATATCGGTGTGCCACGGCTCGAGATAAATAGCGAAAGC 1698
Query 72162 TCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAA 72221
||| ||||| ||||| ||||||||||| | ||||||||||| || || |||| | |
Sbjct 1697 TCCTGGCCGCTTGTTACCTCCCTGATCGACATATCTAGCGGTATTGTTGAAAACGCGGAG 1638
Query 72222 CATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACG 72281
||| |||| ||| ||||| || | |||||| || || | || || ||| | ||||
Sbjct 1637 CATGGGAACAATTCCATTTGAGGAACCATTCGTTCCCGCAATGTAAGAGCCAGTACCACG 1578
Query 72282 AATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTT 72341
||| | ||| ||||| || || || || | || || || || || || |||
Sbjct 1577 AATGCGGTGAATGTTGAGACCAATACCACCAGCAGTCTTTGAAATCAAAGCACAAGTTTT 1518
Query 72342 TAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGA 72401
||||| || || || ||||| ||||| || ||| |||| | | ||||| || ||
Sbjct 1517 CAACGTGTCGTAAATACCCTCGATACTGTCTTCCTTCATATCGATGAGAAAGCAAGAAGC 1458
Query 72402 CATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTT 72461
||| || | | || || ||||| || | || ||||||||||| || || ||||
Sbjct 1457 CATCTGAGGTTGGGGGGTACCAGCATTGAAGAGTGTGGGAGAAGCGTGAGTGAAAAATTT 1398
Query 72462 TTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTAC 72521
| |||| ||||| || ||||| || || |||| ||| ||| ||||| ||
Sbjct 1397 CTGGGACATGAGATTATAGGTCTCGATGACTTTCTCTACATCATCCCCATGAATTCCAAC 1338
Query 72522 CGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAA 72581
|| |||||||| | ||| || || || | |||| | | |||| ||| ||| | ||
Sbjct 1337 AGCAACACGCATGATCATGTGTTGCGGGCGTTCAGCAACCTTGCCATTGATTCGAAGCAG 1278
Query 72582 GTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAA 72639
|| || |||| ||||| || || || || | ||| ||||| || || || ||
Sbjct 1277 ATAAGACCGCTCCAGGGTTTTGAATCCGAAGTATTGGTAGTTGAAA--TCACGATCATAG 1220
Query 72640 ATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACT-TGA 72698
| ||| | || || | || ||| || | ||| | || || | || ||
Sbjct 1219 ACAATGGCAGAGTTAAATTCATCTGCATGACGCATTACTGTTTCGTACGT-ACCCTGCGA 1161
Query 72699 AATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCAC 72758
|| ||||| | | | ||||| || || || | | | | || || |||||
Sbjct 1160 TATCATCGGGGCAGGCCGTTGGTTTTTCGGGTTGTGGTAATGGTACAGGTCATCTATCAC 1101
Query 72759 TTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAG 72818
| | |||| |||| || |||| |||||| || || ||||| ||||| | || |||||
Sbjct 1100 TGAAGAAAATTGTTTCTTCGTTTGCTTGTGGAGGTTGGATACAGCTATCCGTGCAGCTAG 1041
Query 72819 AATGGCATAATCTGGATG 72836
|||||||| || || ||
Sbjct 1040 GATGGCATAGTCGGGGTG 1023
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671106750419680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |