Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq426 150 3e-31 >seq426 Length=8128 Score = 150 bits (166), Expect = 3e-31 Identities = 338/502 (67%), Gaps = 23/502 (5%) Strand=Plus/Plus Query 125361 ATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCC 125420 || || || |||||| | |||| || |||||||| || || | | ||| | || Sbjct 4808 ATCCGCAAGAAGGCTGATTGGGCCATCCGGTGGATTGAGGATAAAGAATCTAGCTTTGCA 4867 Query 125421 GACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCC 125480 | | || || || ||||| || || || ||||||||||| || |||||| | Sbjct 4868 CAGCGCCTCGTCGCCTTCGCGGCTGTTGAAGGCATCTTCTTCAGTGGATCTTTTGCTTCT 4927 Query 125481 ATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATA 125540 ||||| ||||||||||| || || |||||||| || || || ||||||| |||| Sbjct 4928 ATCTTCTGGCTCAAGAAACGAGGCCTCATGCCTGGGCTTACATTTTCTAACGAGCTTATC 4987 Query 125541 TCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT-ATCTGC 125598 ||||| ||||||||| | ||| ||| || ||| ||| || || || || || | | Sbjct 4988 TCTCGTGACGAGGGCTTGCACACTGATTTCGCCTGTCTTCTCTTCTCCCACCTCCGCCAC 5047 Query 125599 GTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGA 125658 ||| | |||| | | ||| | | ||||| || || ||||| | || Sbjct 5048 CGCCCCACCCCAGAGGC--TGTTGAGAGGATCATC---------ACTGAGGCCGTCACGA 5096 Query 125659 TAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGC 125718 |||| || ||||| || | || | || || ||| | | || |||||| ||||| Sbjct 5097 TAGAGCAGGAGTTCCTCTCAGATGCGCTCCCAGTCGCGCTTCTCGGAATGAACGCCAAGC 5156 Query 125719 TAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTG-ATT-GGCCG 125776 | ||||| | ||||| |||||||| || || || || || |||| ||| ||| Sbjct 5157 TCATGTGTCAATACATCGAGTTTGTCGCTGACCGCCTCCT-----CGTTGCATTGGGCAA 5211 Query 125777 CAAGA---TTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGG 125833 ||||| | |||||| ||| ||| || ||||| |||||| || ||| || |||| || Sbjct 5212 CAAGAAAGTCTACAACTCCACGAACCCATTTGACTTCATGGACAACATCTCGCTAGCTGG 5271 Query 125834 TAAGACCAACTTTTTCGAGAAG 125855 ||||||||||| || |||||| Sbjct 5272 CAAGACCAACTTCTTTGAGAAG 5293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741023369787680