Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq426 150 3e-31
>seq426
Length=8128
Score = 150 bits (166), Expect = 3e-31
Identities = 338/502 (67%), Gaps = 23/502 (5%)
Strand=Plus/Plus
Query 125361 ATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCC 125420
|| || || |||||| | |||| || |||||||| || || | | ||| | ||
Sbjct 4808 ATCCGCAAGAAGGCTGATTGGGCCATCCGGTGGATTGAGGATAAAGAATCTAGCTTTGCA 4867
Query 125421 GACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCC 125480
| | || || || ||||| || || || ||||||||||| || |||||| |
Sbjct 4868 CAGCGCCTCGTCGCCTTCGCGGCTGTTGAAGGCATCTTCTTCAGTGGATCTTTTGCTTCT 4927
Query 125481 ATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATA 125540
||||| ||||||||||| || || |||||||| || || || ||||||| ||||
Sbjct 4928 ATCTTCTGGCTCAAGAAACGAGGCCTCATGCCTGGGCTTACATTTTCTAACGAGCTTATC 4987
Query 125541 TCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT-ATCTGC 125598
||||| ||||||||| | ||| ||| || ||| ||| || || || || || | |
Sbjct 4988 TCTCGTGACGAGGGCTTGCACACTGATTTCGCCTGTCTTCTCTTCTCCCACCTCCGCCAC 5047
Query 125599 GTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGA 125658
||| | |||| | | ||| | | ||||| || || ||||| | ||
Sbjct 5048 CGCCCCACCCCAGAGGC--TGTTGAGAGGATCATC---------ACTGAGGCCGTCACGA 5096
Query 125659 TAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGC 125718
|||| || ||||| || | || | || || ||| | | || |||||| |||||
Sbjct 5097 TAGAGCAGGAGTTCCTCTCAGATGCGCTCCCAGTCGCGCTTCTCGGAATGAACGCCAAGC 5156
Query 125719 TAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTG-ATT-GGCCG 125776
| ||||| | ||||| |||||||| || || || || || |||| ||| |||
Sbjct 5157 TCATGTGTCAATACATCGAGTTTGTCGCTGACCGCCTCCT-----CGTTGCATTGGGCAA 5211
Query 125777 CAAGA---TTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGG 125833
||||| | |||||| ||| ||| || ||||| |||||| || ||| || |||| ||
Sbjct 5212 CAAGAAAGTCTACAACTCCACGAACCCATTTGACTTCATGGACAACATCTCGCTAGCTGG 5271
Query 125834 TAAGACCAACTTTTTCGAGAAG 125855
||||||||||| || ||||||
Sbjct 5272 CAAGACCAACTTCTTTGAGAAG 5293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741023369787680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |