Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq1161 134 3e-26
>seq1161
Length=5408
Score = 134 bits (148), Expect = 3e-26
Identities = 170/231 (74%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| || | || | ||| || ||||| | || ||||| |||||||||||||| |||
Sbjct 4160 ATTCCACCACGGAGACGAAGGACAAGATGGAGAGTCGATTCCTTCTGAATATTATAATCA 4219
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| | || | || ||||| || || ||||| ||||| || || | || ||||| ||
Sbjct 4220 GACAAGGTGCGGCCATCTTCCAGCTGCTTTCCCGCAAAGATCAGACGTTGCTGATCTGGT 4279
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCT-TTTACATTTTCTACGGTATCGCTAGGTTC 104508
|| || || || || ||||| || ||| || |||||||| || | |||||| || |||
Sbjct 4280 GGGATGCCCTCCTTGTCCTGGAT-TTTACTCTTTACATTGTCAATGGTATCAGAAGATTC 4338
Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| | |||||| ||||| ||||| || ||||| || | | | |||||
Sbjct 4339 CACCTCCAATGTAATGGTCTTGCCAGTTAGAGTTTTGACGACTGTGTGCAT 4389
Score = 104 bits (114), Expect = 5e-17
Identities = 142/193 (74%), Gaps = 4/193 (2%)
Strand=Plus/Plus
Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428
|| || || || || ||||| || || || | ||| ||||| || || || ||||||||
Sbjct 3743 TCCTTTTGGATGTTGTAGTCGGAGAGTGTCCGACCATCTTCCAGCTGCTTACCAGCAAAG 3802
Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT-TTTACATT 104487
|| || | ||| || || || || || ||||| ||||||||||| ||| || ||||| ||
Sbjct 3803 ATGAGGCGCTGCTGGTCTGGGGGAATCCCTTCCTTATCCTGAAT-TTTACTCTTTACGTT 3861
Query 104488 TTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTA 104546
|| | |||||| || | || || || ||||| || || || || || || ||||| |
Sbjct 3862 GTCAATAGTATCG-GAGCTCTCAACTTCGAGTGTGATGGTTTTGCCGGTCAGGGTTTTCA 3920
Query 104547 CAAATATCTGCAT 104559
| || ||||||||
Sbjct 3921 CGAAAATCTGCAT 3933
Score = 104 bits (114), Expect = 5e-17
Identities = 155/215 (72%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
|| || || || | ||| ||||| || || |||||||| || || || || | || ||
Sbjct 3950 AGGACAAGGTGGAGTGTGGATTCCTTTTGGATATTATAATCCGAAAGTGTCCGGCCATCC 4009
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
|| ||||||||||| || || || || | || || || || || || || ||||| ||
Sbjct 4010 TCAAGTTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACCCTCTTTGTCT 4069
Query 104468 TGAATCTTTGCTTTT-ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525
|| || ||||||||| || || || | |||||| || | || || || || || ||||
Sbjct 4070 TGGAT-TTTGCTTTTAACGTTATCAATGGTATC-TGAGCTCTCGACTTCCAGGGTGATAG 4127
Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
| || || || ||||| || || || |||||||||
Sbjct 4128 TTTTGCCGGTCAGTGTCTTAACGAAGATCTGCATT 4162
Score = 100 bits (110), Expect = 7e-16
Identities = 126/173 (73%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
||||| || ||||||||||| || ||||| ||||| | |||||||| || || ||||||
Sbjct 4501 GTAGACTCCTTCTGAATATTGTAATCAGAAAGAGTACGGCCGTCTTCCAGCTGCTTTCCA 4560
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| ||||| || | || || || ||||| || ||||| || || |||||||| | ||
Sbjct 4561 GCGAAAATAAGACGTTGCTGGTCGGGAGGGATGCCTTCCTTGTCTTGAATCTTAGACTTA 4620
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGT 104535
|| || | ||||| | | || ||||| || || || ||||| || ||
Sbjct 4621 ACCGCGTCGATAGTATCACCTGACTCAACCTCGAGAGTGATGGTCTTGCCGGT 4673
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151341338134544
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |