Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq1161 102 7e-17
>seq1161
Length=5408
Score = 102 bits (112), Expect = 7e-17
Identities = 161/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| || | ||| | |||||| || || | ||| |||||||| | ||| || |||
Sbjct 3707 CCACCCCGCAACCTCAACACTAAATGGAGAGTGCTCTCCTTTTGGATGTTGTAGTCGG-- 3764
Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898
| ||||| || ||| |||||||| || || ||||||| | | ||||| ||||| |
Sbjct 3765 AGAGTGTCCGACCATCTTCCAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGGG 3824
Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958
|||| ||||| || || | |||||| ||| ||| | | | ||| || | | || |
Sbjct 3825 GAATCCCTTCCTTATCCTGAATTTTACTCTTTACGTTGTCAATAGTATCGGAGCTCTCAA 3884
Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || | ||||||||||| || || || |||||||| || ||||||||
Sbjct 3885 CTTCGAGTGTGATGGTTTTGCCGGTCAGGGTTTTCACGAAAATCTGCAT 3933
Score = 93.3 bits (102), Expect = 4e-14
Identities = 141/199 (71%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTC 94868
|| ||||||||||| | |||||||| | ||||| | |||||| || |||||||
Sbjct 3965 GTGGATTCCTTTTGGATATTATAATCCG--AAAGTGTCCGGCCATCCTCAAGTTGTTTTC 4022
Query 94869 CGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCT 94928
|| | ||||| | || |||||| ||||| || ||||| |||||||| | ||||| |
Sbjct 4023 CGGCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACCCTCTTTGTCTTGGATTTTGCTTT 4082
Query 94929 TGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAG 94988
| ||| | | || || | | ||||| || | ||||| ||||| || || || |
Sbjct 4083 TAACGTTATCAATGGTATCTGAGCTCTCGACTTCCAGGGTGATAGTTTTGCCGGTCAGTG 4142
Query 94989 TTTTCACAAAGATCTGCAT 95007
| || || |||||||||||
Sbjct 4143 TCTTAACGAAGATCTGCAT 4161
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448269525120480
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |