Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq295 188 9e-43
>seq295
Length=8791
Score = 188 bits (208), Expect = 9e-43
Identities = 582/896 (65%), Gaps = 6/896 (1%)
Strand=Plus/Minus
Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197
|| ||||| || || | |||| |||| || || ||||| || || | | | |
Sbjct 1915 TCAAACTCTTCGCCATAGACATCTGCCAAGCCTGGCGCTTCATTGGGGCAAAAGAGAGTC 1856
Query 63198 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63257
||||| || | | || || || ||||| || ||||| || |||| ||||| | |||
Sbjct 1855 CACTCGCCATTCTTCTCAACACGCTTCATGAACAGATCGGGCGTCCAGAGAGCAAGAAAG 1796
Query 63258 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63317
||||||| || | | ||| || || || ||||| || || | ||| | |
Sbjct 1795 AGATCTCGGGCGCGAACTTCTTCCTTACCATGGTTCTTACGGAGGTCCAAAAACTCAAAG 1736
Query 63318 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63377
||||| | |||||||| || | || || || | | |||| ||||| ||||| ||||||
Sbjct 1735 ATATCGGTGTGCCACGGCTCGAGATAAATAGCGAAAGCTCCTGGCCGCTTGTTACCTCCC 1676
Query 63378 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63437
||||| | ||||||||||| || || |||| | | ||| |||| ||| || |||||
Sbjct 1675 TGATCGACATATCTAGCGGTATTGTTGAAAACGCGGAGCATGGGAACAATTCCATTTGAG 1616
Query 63438 ATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 63497
|||||| || || | || || ||| | ||||||| ||| |||||
Sbjct 1615 GAACCATTCGTTCCCGCAATGTAAGAGCCAGTACCACGAATGCGGTGAATGTTGAGACCA 1556
Query 63498 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCT 63557
|| || || || | || || || || || || ||| |||||||| || ||||||||
Sbjct 1555 ATACCACCAGCAGTCTTTGAAATCAAAGCACAAGTTTTCAACGTGTCGTAAATACCCTCG 1496
Query 63558 ATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 63617
|| || || || |||| | | ||||| || || ||| || | | || ||
Sbjct 1495 ATACTGTCTTCCTTCATATCGATGAGAAAGCAAGAAGCCATCTGAGGTTGGGGGGTACCA 1436
Query 63618 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 63677
||||| || | || ||||||||||| || || |||| | || | ||||| || |||
Sbjct 1435 GCATTGAAGAGTGTGGGAGAAGCGTGAGTGAAAAATTTCTGGGACATGAGATTATAGGTC 1376
Query 63678 TCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGC 63737
|| || || |||| ||| ||||||||| || || |||||||| | ||||||
Sbjct 1375 TCGATGACTTTCTCTACATCATCCCCATGAATTCCAACAGCAACACGCATGATCATGTGT 1316
Query 63738 TGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTA 63797
|| || | |||| | | |||| || ||| | || || || |||| |||||
Sbjct 1315 TGCGGGCGTTCAGCAACCTTGCCATTGATTCGAAGCAGATAAGACCGCTCCAGGGTTTTG 1256
Query 63798 AAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTAT 63855
|| || || || | ||| ||||| || || || || | ||| | ||||| | || ||
Sbjct 1255 AATCCGAAGTATTGGTAGTTGAAA--TCACGATCATAGACAATGGCAGAGTTAAATTCAT 1198
Query 63856 CCTTATATTTGTTAACTATATCCATGGTGATACT-TGAAATAATCGGAGAATGTTTCCCA 63914
| || | ||| | || || | || || || ||||| | | |
Sbjct 1197 CTGCATGACGCATTACTGTTTCGTACGT-ACCCTGCGATATCATCGGGGCAGGCCGTTGG 1139
Query 63915 TTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTT 63974
||||| || || || | | | | || || |||||| | |||| |||| || |||
Sbjct 1138 TTTTTCGGGTTGTGGTAATGGTACAGGTCATCTATCACTGAAGAAAATTGTTTCTTCGTT 1079
Query 63975 TCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATG 64030
| |||||| || || ||||| ||||| | || ||||| |||||||| || || ||
Sbjct 1078 TGCTTGTGGAGGTTGGATACAGCTATCCGTGCAGCTAGGATGGCATAGTCGGGGTG 1023
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622917080502880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |