Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq1161 118 1e-21 seq849 105 6e-18 seq602 98.7 9e-16 >seq1161 Length=5408 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| ||||| | || ||||||||| | || ||||||||| |||||||| ||| Sbjct 3706 GCCACCCCGCAACCTCAACACTAAATGGAGAGTGCTCTCCTTTTGGATGTTGTAGTCGGA 3765 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || || || || |||||||| || || |||| | ||||||||||| || || Sbjct 3766 GAGTGTCCGACCATCTTCCAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGGGG 3825 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| || || ||||| ||| | | || | |||||||| | ||| | Sbjct 3826 AATCCCTTCCTTATCCTGAATTTTACTCTTTACGTTGTCAATAGTATCGGAGCTCTCAAC 3885 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | |||||| ||||| || ||||| |||||||||||||| Sbjct 3886 TTCGAGTGTGATGGTTTTGCCGGTCAGGGTTTTCACGAAAATCTGCAT 3933 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | ||| | ||||| ||||| ||||| || ||||| | Sbjct 4163 CCACCACGGAGACGAAGGACAAGATGGAGAGTCGATTCCTTCTGAATATTATAATCAGAC 4222 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || |||||||| || || |||| | ||| ||||| || || ||| Sbjct 4223 AAGGTGCGGCCATCTTCCAGCTGCTTTCCCGCAAAGATCAGACGTTGCTGATCTGGTGGG 4282 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| |||||| ||| | | || | ||||| | || || | Sbjct 4283 ATGCCCTCCTTGTCCTGGATTTTACTCTTTACATTGTCAATGGTATCAGAAGATTCCACC 4342 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 || | |||| ||| || || ||||||||||| |||| Sbjct 4343 TCCAATGTAATGGTCTTGCCAGTTAGAGTTTTGACGA 4379 >seq849 Length=6452 Score = 105 bits (116), Expect = 6e-18 Identities = 132/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| |||||||| ||||| || | || || |||||| ||||||||||| || ||| Sbjct 1642 CCTTCTGAATGTTATAATCACTAAGCGTCCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGA 1701 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | || || |||||||| || |||||||| || ||||| |||||| ||||| | | Sbjct 1702 TCAACCGTTGCTGGTCGGGTGGGATTCCCTCCTTGTCCTGGATTTTGCTCTTGACATTGT 1761 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || ||| ||||||||| || | || | ||| || || ||||| || || |||| Sbjct 1762 CGATGGTGTCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTTAGGGTCTTGACGA 1821 Query 131225 A 131225 | Sbjct 1822 A 1822 >seq602 Length=25977 Score = 98.7 bits (108), Expect = 9e-16 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||||| ||| || || | || | |||||||||||| || |||||||| || Sbjct 7922 CCACCGCGCAGACGTAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAA 7981 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| ||| |||| | || |||||||| || ||| Sbjct 7982 AGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGGGGG 8041 Query 131128 ATTCCTTCTTTGTCGGT 131144 ||||| || ||||| || Sbjct 8042 ATTCCCTCCTTGTCTGT 8058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471989978181120