Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq295 188 9e-43 >seq295 Length=8791 Score = 188 bits (208), Expect = 9e-43 Identities = 440/662 (66%), Gaps = 4/662 (1%) Strand=Plus/Minus Query 63052 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 63111 |||||| || | | || || || ||||| || ||||| || |||| ||||| | ||| Sbjct 1856 CCACTCGCCATTCTTCTCAACACGCTTCATGAACAGATCGGGCGTCCAGAGAGCAAGAAA 1797 Query 63112 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63171 ||||||| || | | ||| || || || ||||| || || | ||| | | Sbjct 1796 GAGATCTCGGGCGCGAACTTCTTCCTTACCATGGTTCTTACGGAGGTCCAAAAACTCAAA 1737 Query 63172 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63231 ||||| | |||||||| || | || || || | | |||| ||||| ||||| ||||| Sbjct 1736 GATATCGGTGTGCCACGGCTCGAGATAAATAGCGAAAGCTCCTGGCCGCTTGTTACCTCC 1677 Query 63232 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 63291 |||||| | ||||||||||| || || |||| | | ||| |||| ||| ||||| || Sbjct 1676 CTGATCGACATATCTAGCGGTATTGTTGAAAACGCGGAGCATGGGAACAATTCCATTTGA 1617 Query 63292 TGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACC 63351 | |||||| || || | || || ||| | ||||||| ||| ||||| Sbjct 1616 GGAACCATTCGTTCCCGCAATGTAAGAGCCAGTACCACGAATGCGGTGAATGTTGAGACC 1557 Query 63352 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 63411 || || || || | || || || || || || ||| ||||| || || || ||||| Sbjct 1556 AATACCACCAGCAGTCTTTGAAATCAAAGCACAAGTTTTCAACGTGTCGTAAATACCCTC 1497 Query 63412 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 63471 ||||| || ||| |||| | | ||||| || || ||| || | | || || Sbjct 1496 GATACTGTCTTCCTTCATATCGATGAGAAAGCAAGAAGCCATCTGAGGTTGGGGGGTACC 1437 Query 63472 CGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGT 63531 ||||| || | || |||||||||||||| || |||| | || | ||||| || || Sbjct 1436 AGCATTGAAGAGTGTGGGAGAAGCGTGAGTGAAAAATTTCTGGGACATGAGATTATAGGT 1377 Query 63532 CTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTG 63591 ||| || || |||| ||| ||||||||| || || |||||||| | |||||| Sbjct 1376 CTCGATGACTTTCTCTACATCATCCCCATGAATTCCAACAGCAACACGCATGATCATGTG 1317 Query 63592 CTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTT 63651 || || | |||| | | |||| || ||| | || || || |||| ||||| Sbjct 1316 TTGCGGGCGTTCAGCAACCTTGCCATTGATTCGAAGCAGATAAGACCGCTCCAGGGTTTT 1257 Query 63652 AAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTA 63709 || || || || | ||| ||||| || || || || | ||| | ||||| | || | Sbjct 1256 GAATCCGAAGTATTGGTAGTTGAAA--TCACGATCATAGACAATGGCAGAGTTAAATTCA 1199 Query 63710 TC 63711 || Sbjct 1198 TC 1197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633601363892800