Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq1161 105 6e-18
>seq1161
Length=5408
Score = 105 bits (116), Expect = 6e-18
Identities = 153/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || || || ||||||| ||| |||||||| ||||||| ||| ||
Sbjct 3933 ATGCAGATTTTCGTGAAAACCCTGACCGGCAAAACCATCACACTCGAAGTTGAGAGCTCC 3874
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
|| ||||| || | ||| ||||| || || ||||||||||| || |||||
Sbjct 3873 GATACTATTGACAACGTAAAGAGTAAAATTCAGGATAAGGAAGGGATTCCCCCAGACCAG 3814
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| | || ||||| || || || | ||||||| ||| || | ||| |||||
Sbjct 3813 CAGCGCCTCATCTTTGCTGGTAAGCAGCTGGAAGATGGTCGGACACTCTCCGACTACAAC 3754
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGG 25214
|| ||||| || ||| || ||||||||| | |||
Sbjct 3753 ATCCAAAAGGAGAGCACTCTCCATTTAGTGTTGAGG 3718
Score = 86.0 bits (94), Expect = 5e-12
Identities = 144/206 (70%), Gaps = 2/206 (1%)
Strand=Plus/Minus
Query 25023 ACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTGAAG-CA 25081
||||| || ||||||| |||| || ||||| ||| |||||||| | | ||| |
Sbjct 4673 ACCGGCAAGACCATCACTCTCGAGGTTGAGTCAGGTGATACTATCGACGCGGTTAAGTCT 4614
Query 25082 AAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAA 25141
|| | ||| ||||| ||||| || || || ||||| || || ||||||| || || ||
Sbjct 4613 AAGATTCAA-GACAAGGAAGGCATCCCTCCCGACCAGCAACGTCTTATTTTCGCTGGAAA 4555
Query 25142 ACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACA 25201
|| | ||||| | || ||| | |||||||||||||| || || || || || ||
Sbjct 4554 GCAGCTGGAAGACGGCCGTACTCTTTCTGATTACAATATTCAGAAGGAGTCTACTCTTCA 4495
Query 25202 TTTAGTGCTAAGGCTAAGAGGAGGAA 25227
|| || || | || | |||||||
Sbjct 4494 CTTGGTTCTCCGTCTCCGTGGAGGAA 4469
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433307572376420
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |