Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1161 105 6e-18 >seq1161 Length=5408 Score = 105 bits (116), Expect = 6e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || || || ||||||| ||| |||||||| ||||||| ||| || Sbjct 3933 ATGCAGATTTTCGTGAAAACCCTGACCGGCAAAACCATCACACTCGAAGTTGAGAGCTCC 3874 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || ||||| || | ||| ||||| || || ||||||||||| || ||||| Sbjct 3873 GATACTATTGACAACGTAAAGAGTAAAATTCAGGATAAGGAAGGGATTCCCCCAGACCAG 3814 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || ||||| || || || | ||||||| ||| || | ||| ||||| Sbjct 3813 CAGCGCCTCATCTTTGCTGGTAAGCAGCTGGAAGATGGTCGGACACTCTCCGACTACAAC 3754 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGG 25214 || ||||| || ||| || ||||||||| | ||| Sbjct 3753 ATCCAAAAGGAGAGCACTCTCCATTTAGTGTTGAGG 3718 Score = 86.0 bits (94), Expect = 5e-12 Identities = 144/206 (70%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 25023 ACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTGAAG-CA 25081 ||||| || ||||||| |||| || ||||| ||| |||||||| | | ||| | Sbjct 4673 ACCGGCAAGACCATCACTCTCGAGGTTGAGTCAGGTGATACTATCGACGCGGTTAAGTCT 4614 Query 25082 AAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAA 25141 || | ||| ||||| ||||| || || || ||||| || || ||||||| || || || Sbjct 4613 AAGATTCAA-GACAAGGAAGGCATCCCTCCCGACCAGCAACGTCTTATTTTCGCTGGAAA 4555 Query 25142 ACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACA 25201 || | ||||| | || ||| | |||||||||||||| || || || || || || Sbjct 4554 GCAGCTGGAAGACGGCCGTACTCTTTCTGATTACAATATTCAGAAGGAGTCTACTCTTCA 4495 Query 25202 TTTAGTGCTAAGGCTAAGAGGAGGAA 25227 || || || | || | ||||||| Sbjct 4494 CTTGGTTCTCCGTCTCCGTGGAGGAA 4469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433307572376420