Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_008520.2
Length=132239
Score E
Sequences producing significant alignments: (Bits) Value
seq1161 93.3 4e-14
>seq1161
Length=5408
Score = 93.3 bits (102), Expect = 4e-14
Identities = 166/239 (69%), Gaps = 5/239 (2%)
Strand=Plus/Minus
Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246
||||| ||||| || ||||| |||||||||||||||| || | ||| || | |
Sbjct 3933 ATGCAGATTTTCGTGAAAACCCTGACCGGCAAAACCATCACACTCGAAGTTGAGAGCTCC 3874
Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306
||| || ||| | | ||||| |||||| || || ||||| ||||| || ||
Sbjct 3873 GATACTATTGACAACGTAAAGAGTAAAATTCAGGATAAGGAAGGGATTCCCCCAGACCAG 3814
Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTATA 111364
|| | || || | ||| || || || |||||||| || | ||| | |||| || |
Sbjct 3813 CAGCGCCTCATCTTTGCTGGTAAGCAGCTGGAAGATGGTCGGACACTCT--CCGACTACA 3756
Query 111365 ATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG-CAATAAATA 111422
| || ||||| || || || |||||||||||| | |||| ||||| |||||||||
Sbjct 3755 ACATCCAAAAGGAGAGCACTCTCCATTTAGTGTTGAGGTTGCGGGGTGGCCAATAAATA 3697
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 423020057365600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |