Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq1161 113 4e-20 seq849 102 7e-17 seq602 87.8 2e-12 >seq1161 Length=5408 Score = 113 bits (124), Expect = 4e-20 Identities = 136/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 22231 GTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGAC 22290 || |||||| |||| || || || | || | || |||||| | | |||||| | ||| Sbjct 4377 GTCAAAACTCTAACTGGCAAGACCATTACATTGGAGGTGGAATCTTCTGATACCATTGAC 4318 Query 22291 GATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATA 22350 || | || ||||| || ||||||||||| || ||||| ||||| |||||||| || Sbjct 4317 AATGTAAAGAGTAAAATCCAGGACAAGGAGGGCATCCCACCAGATCAGCAACGTCTGATC 4258 Query 22351 TTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAA 22410 ||||| || || ||| | || ||| ||||||| | || ||||| || ||||| || ||| Sbjct 4257 TTTGCGGGAAAGCAGCTGGAAGATGGCCGCACCTTGTCTGATTATAATATTCAGAAGGAA 4198 Query 22411 TCCAC 22415 || || Sbjct 4197 TCGAC 4193 Score = 82.4 bits (90), Expect = 6e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || |||||||||||||| || || || ||||| || ||||||||||| || || || || Sbjct 4613 AAGATTCAAGACAAGGAAGGCATCCCTCCCGACCAGCAACGTCTTATTTTCGCTGGAAAG 4554 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||| | || || ||| || | || |||||||| ||||| || || || || | || Sbjct 4553 CAGCTGGAAGACGGCCGTACTCTTTCTGATTACAATATTCAGAAGGAGTCTACTCTTCAC 4494 Query 22423 TTAGTTTTGCGATTGCGCGGAGG 22445 || ||| | || | || ||||| Sbjct 4493 TTGGTTCTCCGTCTCCGTGGAGG 4471 >seq849 Length=6452 Score = 102 bits (112), Expect = 7e-17 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 22228 TTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTG 22287 || || || || |||| || || || |||||||||| || || ||| ||| ||| | Sbjct 1822 TTCGTCAAGACCCTAACGGGCAAGACCATCACTCTTGAGGTCGAGTCCAGCGACACCATC 1763 Query 22288 GACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTT 22347 ||| || |||| ||||| || ||||||||||| || |||||||| || ||||| | Sbjct 1762 GACAATGTCAAGAGCAAAATCCAGGACAAGGAGGGAATCCCACCCGACCAGCAACGGTTG 1703 Query 22348 ATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || ||||||||||| ||| | ||||| ||| || | ||||| |||||||| || Sbjct 1702 ATCTTTGCCGGCAAGCAGCTTGAGGACGGCCGGACGCTTAGTGATTATAACATTCAGAA 1644 >seq602 Length=25977 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370 |||||||||||| || || ||||| || ||||| || || || |||||||| ||| | || Sbjct 8056 AGACAAGGAGGGAATCCCCCCCGACCAGCAACGCCTGATCTTCGCCGGCAAGCAGCTCGA 7997 Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTT 22430 |||| |||||| | || || |||||||| || || || || ||| | || | || | Sbjct 7996 GGATGGCCGCACTCTTTCTGACTACAACATCCAGAAGGAGTCGACCCTTCACCTCGTCCT 7937 Query 22431 GCGATTGCGCGGAGGT 22446 || ||||||| ||| Sbjct 7936 ACGTCTGCGCGGTGGT 7921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419708213497420