Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq3757 93.3 9e-14 >seq3757 Length=11637 Score = 93.3 bits (102), Expect = 9e-14 Identities = 94/120 (78%), Gaps = 2/120 (2%) Strand=Plus/Minus Query 280704 CACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA-GC 280762 ||||| ||||| ||||||||||| || || ||| ||||| | || ||| ||| || Sbjct 1019 CACTCGCGCATGCGCGGTCTTTCCGGCGGTCAGCGTGTCAAGGTCGTGCTCGCAGCTTGC 960 Query 280763 TCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGA 280822 || |||||| | |||||| ||||||| ||||||||||| |||||||| || ||||| || Sbjct 959 TC-GTGGCAGCGTCCTCACTTGATCGTCCTCGACGAGCCAACCAACTACCTCGACCGTGA 901 Score = 87.8 bits (96), Expect = 4e-12 Identities = 131/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 279378 GCATATGGTGGGAAGATTCTGCTAAACTCTACCCGCCTCAACATCAAGCGTGGCAACCGG 279437 || || |||| ||||| ||||| ||| |||| ||| | ||||||| || | || Sbjct 2390 GCCTACGGTGCTAAGATCCTGCTTAACCAGACCCACCTGCGCCTCAAGCGCGGTCAACGA 2331 Query 279438 TATGGTCTCATCGGTCCCAATGGAGCGGGTAAGAGCACTCTAATGCGCGCCATTGCAAAC 279497 |||||||| |||| ||||| || | ||||| ||| || ||||||||||| ||| Sbjct 2330 TATGGTCTTCTCGGCCCCAACGGTTCCGGTAAATCCACCCTCATGCGCGCCATCAACAAC 2271 Query 279498 GGTCAGCTGGAAGGATTTCCTAACGCATCTGAGGTAAGGACAGTGTATGTAGAGCACGAC 279557 | ||| ||||||| || || || |||||| | ||| || | || ||||||||| Sbjct 2270 GAGCAGGTGGAAGGTTTCCCCAAGAAGGATGAGGTCAAGACTGTCTTCGTCGAGCACGAC 2211 Query 279558 ATCGAC 279563 ||||| Sbjct 2210 CTCGAC 2205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027785861692988