Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq3757 93.3 9e-14
>seq3757
Length=11637
Score = 93.3 bits (102), Expect = 9e-14
Identities = 94/120 (78%), Gaps = 2/120 (2%)
Strand=Plus/Minus
Query 280704 CACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA-GC 280762
||||| ||||| ||||||||||| || || ||| ||||| | || ||| ||| ||
Sbjct 1019 CACTCGCGCATGCGCGGTCTTTCCGGCGGTCAGCGTGTCAAGGTCGTGCTCGCAGCTTGC 960
Query 280763 TCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGA 280822
|| |||||| | |||||| ||||||| ||||||||||| |||||||| || ||||| ||
Sbjct 959 TC-GTGGCAGCGTCCTCACTTGATCGTCCTCGACGAGCCAACCAACTACCTCGACCGTGA 901
Score = 87.8 bits (96), Expect = 4e-12
Identities = 131/186 (70%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 279378 GCATATGGTGGGAAGATTCTGCTAAACTCTACCCGCCTCAACATCAAGCGTGGCAACCGG 279437
|| || |||| ||||| ||||| ||| |||| ||| | ||||||| || | ||
Sbjct 2390 GCCTACGGTGCTAAGATCCTGCTTAACCAGACCCACCTGCGCCTCAAGCGCGGTCAACGA 2331
Query 279438 TATGGTCTCATCGGTCCCAATGGAGCGGGTAAGAGCACTCTAATGCGCGCCATTGCAAAC 279497
|||||||| |||| ||||| || | ||||| ||| || ||||||||||| |||
Sbjct 2330 TATGGTCTTCTCGGCCCCAACGGTTCCGGTAAATCCACCCTCATGCGCGCCATCAACAAC 2271
Query 279498 GGTCAGCTGGAAGGATTTCCTAACGCATCTGAGGTAAGGACAGTGTATGTAGAGCACGAC 279557
| ||| ||||||| || || || |||||| | ||| || | || |||||||||
Sbjct 2270 GAGCAGGTGGAAGGTTTCCCCAAGAAGGATGAGGTCAAGACTGTCTTCGTCGAGCACGAC 2211
Query 279558 ATCGAC 279563
|||||
Sbjct 2210 CTCGAC 2205
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027785861692988
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |