Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq1161 113 4e-20 >seq1161 Length=5408 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 114168 CTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAA 114227 ||||| |||||||| | || || ||||| |||||||| ||| | || ||| | Sbjct 3719 CTCAACACTAAATGGAGAGTGCTCTCCTTTTGGATGTTGTAGTCGGAGAGTGTCCGACCA 3778 Query 114228 TCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTG 114287 ||||| || || |||||||| ||||||| ||||| ||||| || ||||| ||||| || Sbjct 3779 TCTTCCAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGGGGAATCCCTTCCTTA 3838 Query 114288 TCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACC 114347 || ||| || |||| | |||| || |||| | || || || | || | Sbjct 3839 TCCTGAATTTTACTCTTTACGTTGTCAATAGTATCGGAGCTCTCAACTTCGAGTGTGATG 3898 Query 114348 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||||||||||||| ||||| || ||||||||||| Sbjct 3899 GTTTTGCCGGTCAGGGTTTTCACGAAAATCTGCAT 3933 Score = 102 bits (112), Expect = 7e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || ||||| ||||| || || ||||| | || || ||| ||||||||||| || Sbjct 3965 GTGGATTCCTTTTGGATATTATAATCCGAAAGTGTCCGGCCATCCTCAAGTTGTTTTCCG 4024 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| ||||||| || || ||||| || || || || |||||||| || ||| |||| Sbjct 4025 GCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACCCTCTTTGTCTTGGAT-TTTGCTTTT 4083 Query 114306 AGC-TGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364 | | | |||| ||| || | | ||||| |||| ||| | |||||||||||||| || Sbjct 4084 AACGTTATCAATGGTATCTGAGCTCTCGACTTCCAGGGTGATAGTTTTGCCGGTCAGTGT 4143 Query 114365 TTTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 4144 CTTAACGAAGATCTGCAT 4161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420114594339216