Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq426 192 1e-43 seq295 105 1e-17 >seq426 Length=8128 Score = 192 bits (212), Expect = 1e-43 Identities = 355/515 (69%), Gaps = 7/515 (1%) Strand=Plus/Plus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACG 42692 ||||||||| |||||||| || ||||| || ||||| ||| | || | | Sbjct 4802 CCCTGCATCCGCAAGAAGGCTGATTGGGCCATCCGGTGGATTGAGGATAAAGAATCTAGC 4861 Query 42693 TTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTC 42752 || | || | || || ||||| | || || || |||||||||||| || | || Sbjct 4862 TTTGCACAGCGCCTCGTCGCCTTCGCGGCTGTTGAAGGCATCTTCTTCAGTGGATCTTTT 4921 Query 42753 GCCTCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGA 42811 || || ||||||||||||||| | ||| || ||||| || || || || || ||||| Sbjct 4922 GCTTCTATCTTCTGGCTCAAGAAACGAGGCCTC-ATGCCTGGGCTTACATTTTCTAACGA 4980 Query 42812 ACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCA 42871 || ||| | |||||||| |||| | || || ||||| || || ||||| ||| Sbjct 4981 GCTTATCTCTCGTGACGAGGGCTTGCACACTGATTTCGCCTGTCTTCTCTTCTC---CCA 5037 Query 42872 CCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGAT 42931 |||| | ||| ||| | ||| || | |||||||| |||||||| ||| Sbjct 5038 CCTCCGCCACCGCCCCACCCCAGAGGCTGTTGAGAGGATCATCACTGAGGCCGTCACGAT 5097 Query 42932 CGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCT 42991 ||| ||||||||||| | | |||| || || | || |||| |||||| | | || Sbjct 5098 AGAGCAGGAGTTCCTCTCAGATGCGCTCCCAGTCGCGCTTCTCGGAATGAACGCCAAGCT 5157 Query 42992 CATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCC 43050 |||||| | |||||| ||| ||||| |||| ||||| || || |||| || Sbjct 5158 CATGTGTCAATACATCGAGTTTGTCGCTGACCGCCTCCTCGTTGCAT-TGGGCAACAAGA 5216 Query 43051 GCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGA 43110 |||||||| | || ||| || ||||| ||||| ||||||||| | | ||||||| Sbjct 5217 AAGTCTACAACTCCACGAACCCATTTGACTTCATGGACAACATCTCGCTAGCTGGCAAGA 5276 Query 43111 CCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 ||||||| || |||||||| || | |||||||||| Sbjct 5277 CCAACTTCTTTGAGAAGCGTGTTGGCGACTACCAG 5311 >seq295 Length=8791 Score = 105 bits (116), Expect = 1e-17 Identities = 300/459 (65%), Gaps = 14/459 (3%) Strand=Plus/Minus Query 244970 GGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATC 245029 ||||| | |||| |||||||||| | || || | || |||||| || ||||| || Sbjct 1870 GGGCAAAAGAGAGTCCACTCGCCATTCTTCTCAACACGCTTCATGAACAGATCGGGCGTC 1811 Query 245030 CAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGC 245089 ||||| || | ||||| || | || | || ||| ||| |||||| | || Sbjct 1810 CAGAGAGCAAGAAAGAGATCTCGGGCGCGAACTTCTTCCTTACCATGGTTCTTACGGAGG 1751 Query 245090 TCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGC 245149 |||||||| ||||||| ||| |||||| ||||| | || | ||||| || || ||| Sbjct 1750 TCCAAAAACTCAAAGATATCGGTGTGCCACGGCTCGAGATAAATAGCGAAAGCTCCTGGC 1691 Query 245150 CGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCG----CGTTGAAGATGCGCAGGGT 245205 |||||||| |||||||| || | | | || |||| |||||| | ||| || | Sbjct 1690 CGCTTGTTACCTCCCTGATCGA----CATATCTAGCGGTATTGTTGAAAACGCGGAGCAT 1635 Query 245206 AGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCC---T 245262 || || || || || ||| || || || ||| ||||| | ||| | || | | Sbjct 1634 GGGAACAATTCCATTTGAGGAACCATTCGTTCCCGCAATGTAAGAGCCAGTACCACGAAT 1575 Query 245263 GAGGTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTT 245322 | ||| || || | || | || || || ||| || || | || || | || Sbjct 1574 GCGGTGAATGTTG---AGACCAATACCACCAGCAGTCTTTGAAATCAAAGCACAAGTTTT 1518 Query 245323 GATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGA 245382 | ||||| || ||||| || ||||| |||||| | || |||||||| || | Sbjct 1517 CAACGTGTCGTAAATACCCTCGATACTGTCTTCCTTCATATCGATGAGAAAGCAAGAAGC 1458 Query 245383 CAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGG 245421 || ||| || | |||| | | | ||||| || ||||| Sbjct 1457 CATCTGAGGTTGGGGGGTACCAGCATTGAAGAGTGTGGG 1419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944293541199680