Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq1161 129 1e-24
seq849 87.8 4e-12
>seq1161
Length=5408
Score = 129 bits (142), Expect = 1e-24
Identities = 168/231 (73%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | || || || || | ||| ||| |||||||||||||| || |
Sbjct 3935 CCACCCCGAAGACGGAGGACAAGGTGGAGTGTGGATTCCTTTTGGATATTATAATCCGAA 3994
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || || || || | ||||||||| |||||||| || || || || ||||
Sbjct 3995 AGTGTCCGGCCATCCTCAAGTTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTGGG 4054
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423
|| || ||||| || |||||||| ||| ||||| || || | ||| |||| ||
Sbjct 4055 ATACCCTCTTTGTCTTGGATTTTGCTTTTAACGTTATCAATGGTATCTGAGCTC---TCG 4111
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
||||| || ||||| || || |||||||| ||||| ||||| |||||||||
Sbjct 4112 ACTTCCAGGGTGATAGTTTTGCCGGTCAGTGTCTTAACGAAGATCTGCATT 4162
Score = 120 bits (132), Expect = 7e-22
Identities = 171/237 (72%), Gaps = 3/237 (1%)
Strand=Plus/Plus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
|||||| ||||| | ||| || ||||| | || ||| || || |||||||| || |
Sbjct 4162 TCCACCACGGAGACGAAGGACAAGATGGAGAGTCGATTCCTTCTGAATATTATAATCAGA 4221
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
| ||||| || ||||| | || ||||| || ||||||||||| || ||| |||
Sbjct 4222 CAAGGTGCGGCCATCTTCCAGCTGCTTTCCCGCAAAGATCAGACGTTGCTGATCTGGTGG 4281
Query 288366 GATTCCTTCTTTATCCTGGATTTT-CGCTTTCACGTTTTCTATAGAATCGCTCGATTCTA 288424
||| || || || ||||||||||| | |||| || || || || | ||| ||||| |
Sbjct 4282 GATGCCCTCCTTGTCCTGGATTTTACTCTTT-ACATTGTCAATGGTATCAGAAGATTCCA 4340
Query 288425 CTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT-TATGTTA 288480
| || | || || ||||| || || ||||| ||||||| | | ||||| |||||||
Sbjct 4341 CCTCCAATGTAATGGTCTTGCCAGTTAGAGTTTTGACGACTGTGTGCATATATGTTA 4397
>seq849
Length=6452
Score = 87.8 bits (96), Expect = 4e-12
Identities = 129/180 (72%), Gaps = 2/180 (1%)
Strand=Plus/Plus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
|| || || ||||| || ||||| || ||||| || | || || || || ||||||
Sbjct 1644 TTCTGAATGTTATAATCACTAAGCGTCCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATC 1703
Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTC 288404
| || || || ||||||||| || || ||||||||||| ||| || || || ||
Sbjct 1704 AACCGTTGCTGGTCGGGTGGGATTCCCTCCTTGTCCTGGATTTT-GCTCTTGACATTGTC 1762
Query 288405 TATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464
|| | ||||| || || || || || ||||| ||||| || || || |||||||||||
Sbjct 1763 GATGGTGTCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTTAGGGTCTTGACGAA 1822
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179595937802504
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |