Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1161 129 1e-24 seq849 87.8 4e-12 >seq1161 Length=5408 Score = 129 bits (142), Expect = 1e-24 Identities = 168/231 (73%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || || | ||| ||| |||||||||||||| || | Sbjct 3935 CCACCCCGAAGACGGAGGACAAGGTGGAGTGTGGATTCCTTTTGGATATTATAATCCGAA 3994 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | ||||||||| |||||||| || || || || |||| Sbjct 3995 AGTGTCCGGCCATCCTCAAGTTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTGGG 4054 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || ||||| || |||||||| ||| ||||| || || | ||| |||| || Sbjct 4055 ATACCCTCTTTGTCTTGGATTTTGCTTTTAACGTTATCAATGGTATCTGAGCTC---TCG 4111 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| || ||||| || || |||||||| ||||| ||||| ||||||||| Sbjct 4112 ACTTCCAGGGTGATAGTTTTGCCGGTCAGTGTCTTAACGAAGATCTGCATT 4162 Score = 120 bits (132), Expect = 7e-22 Identities = 171/237 (72%), Gaps = 3/237 (1%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| ||||| | ||| || ||||| | || ||| || || |||||||| || | Sbjct 4162 TCCACCACGGAGACGAAGGACAAGATGGAGAGTCGATTCCTTCTGAATATTATAATCAGA 4221 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 | ||||| || ||||| | || ||||| || ||||||||||| || ||| ||| Sbjct 4222 CAAGGTGCGGCCATCTTCCAGCTGCTTTCCCGCAAAGATCAGACGTTGCTGATCTGGTGG 4281 Query 288366 GATTCCTTCTTTATCCTGGATTTT-CGCTTTCACGTTTTCTATAGAATCGCTCGATTCTA 288424 ||| || || || ||||||||||| | |||| || || || || | ||| ||||| | Sbjct 4282 GATGCCCTCCTTGTCCTGGATTTTACTCTTT-ACATTGTCAATGGTATCAGAAGATTCCA 4340 Query 288425 CTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT-TATGTTA 288480 | || | || || ||||| || || ||||| ||||||| | | ||||| ||||||| Sbjct 4341 CCTCCAATGTAATGGTCTTGCCAGTTAGAGTTTTGACGACTGTGTGCATATATGTTA 4397 >seq849 Length=6452 Score = 87.8 bits (96), Expect = 4e-12 Identities = 129/180 (72%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || || || ||||| || ||||| || ||||| || | || || || || |||||| Sbjct 1644 TTCTGAATGTTATAATCACTAAGCGTCCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATC 1703 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTC 288404 | || || || ||||||||| || || ||||||||||| ||| || || || || Sbjct 1704 AACCGTTGCTGGTCGGGTGGGATTCCCTCCTTGTCCTGGATTTT-GCTCTTGACATTGTC 1762 Query 288405 TATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || | ||||| || || || || || ||||| ||||| || || || ||||||||||| Sbjct 1763 GATGGTGTCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTTAGGGTCTTGACGAA 1822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179595937802504