Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq1161 116 4e-21 seq849 109 6e-19 >seq1161 Length=5408 Score = 116 bits (128), Expect = 4e-21 Identities = 182/255 (71%), Gaps = 9/255 (4%) Strand=Plus/Plus Query 41973 ATTTATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTG 42032 |||||| | || || | || | |||||| ||||| | |||||||||||||| || ||| Sbjct 3698 ATTTATTGGCCACCCCGCAACCTCAACACTAAATGGAGAGTGCTCTCCTTTTGGATGTTG 3757 Query 42033 TAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGG 42092 || || | || ||||| | || || |||||||||||||| || ||||| ||||||||| Sbjct 3758 TAGTCGGAGAGTGTCCGACCATCTTCCAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGG 3817 Query 42093 TCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC--- 42148 || | || | | ||||| ||| ||| |||| | | ||| | | | || || Sbjct 3818 TCTGGGGGAATCCCTTCCTTATCC-TGAATTTTACTCTTTACGTTGTCAATAGTATCGGA 3876 Query 42149 GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| || || |||| |||||||||||||| || || || || || || || |||| Sbjct 3877 GCTC---TCAACTTCGAGTGTGATGGTTTTGCCGGTCAGGGTTTTCACGAAAATCTGCA- 3932 Query 42209 TTTCACGCCGAATAC 42223 | ||| ||||| || Sbjct 3933 TACCACCCCGAAGAC 3947 Score = 98.7 bits (108), Expect = 1e-15 Identities = 126/171 (74%), Gaps = 6/171 (4%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| |||||||||||||||| ||||| || |||| || |||||||| |||||||| Sbjct 4506 CTCCTTCTGAATATTGTAATCAGAAAGAGTACGGCCGTCTTCCAGCTGCTTTCCAGCGAA 4565 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGA---G 42133 || || || |||||||||| || | || ||||||| | ||| | || | | | | Sbjct 4566 AATAAGACGTTGCTGGTCGGGAGGGATGCCTTCCTTGT-CTTGAATCTTAGACTTAACCG 4624 Query 42134 CGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 42184 ||||| | || || | || || || |||| |||||||| ||||| || Sbjct 4625 CGTCG--ATAGTATCACCTGACTCAACCTCGAGAGTGATGGTCTTGCCGGT 4673 >seq849 Length=6452 Score = 109 bits (120), Expect = 6e-19 Identities = 140/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 42019 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 42078 |||| ||||| || |||||| || ||||| |||| || |||||||| || || || | Sbjct 1642 CCTTCTGAATGTTATAATCACTAAGCGTCCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGA 1701 Query 42079 TGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 42138 | | || |||||||||| ||| | | |||||||||| |||||| |||| | Sbjct 1702 TCAACCGTTGCTGGTCGGGTGGGATTCCCTCCTTGTCCTGGATTTTGCTCTTGACATTGT 1761 Query 42139 CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAA 42198 | | |||||||| || || || || | |||||||| ||||||||||| ||||| || | Sbjct 1762 CGATGGTGTCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTTAGGGTCTTGACGA 1821 Query 42199 AGATTTGCATTTT 42211 || | | | |||| Sbjct 1822 AGCTGTTCGTTTT 1834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543186535661120