Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq1161 116 4e-21
seq849 109 6e-19
>seq1161
Length=5408
Score = 116 bits (128), Expect = 4e-21
Identities = 182/255 (71%), Gaps = 9/255 (4%)
Strand=Plus/Plus
Query 41973 ATTTATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTG 42032
|||||| | || || | || | |||||| ||||| | |||||||||||||| || |||
Sbjct 3698 ATTTATTGGCCACCCCGCAACCTCAACACTAAATGGAGAGTGCTCTCCTTTTGGATGTTG 3757
Query 42033 TAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGG 42092
|| || | || ||||| | || || |||||||||||||| || ||||| |||||||||
Sbjct 3758 TAGTCGGAGAGTGTCCGACCATCTTCCAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGG 3817
Query 42093 TCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC--- 42148
|| | || | | ||||| ||| ||| |||| | | ||| | | | || ||
Sbjct 3818 TCTGGGGGAATCCCTTCCTTATCC-TGAATTTTACTCTTTACGTTGTCAATAGTATCGGA 3876
Query 42149 GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|||| || || |||| |||||||||||||| || || || || || || || ||||
Sbjct 3877 GCTC---TCAACTTCGAGTGTGATGGTTTTGCCGGTCAGGGTTTTCACGAAAATCTGCA- 3932
Query 42209 TTTCACGCCGAATAC 42223
| ||| ||||| ||
Sbjct 3933 TACCACCCCGAAGAC 3947
Score = 98.7 bits (108), Expect = 1e-15
Identities = 126/171 (74%), Gaps = 6/171 (4%)
Strand=Plus/Plus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| |||||||||||||||| ||||| || |||| || |||||||| ||||||||
Sbjct 4506 CTCCTTCTGAATATTGTAATCAGAAAGAGTACGGCCGTCTTCCAGCTGCTTTCCAGCGAA 4565
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGA---G 42133
|| || || |||||||||| || | || ||||||| | ||| | || | | | |
Sbjct 4566 AATAAGACGTTGCTGGTCGGGAGGGATGCCTTCCTTGT-CTTGAATCTTAGACTTAACCG 4624
Query 42134 CGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 42184
||||| | || || | || || || |||| |||||||| ||||| ||
Sbjct 4625 CGTCG--ATAGTATCACCTGACTCAACCTCGAGAGTGATGGTCTTGCCGGT 4673
>seq849
Length=6452
Score = 109 bits (120), Expect = 6e-19
Identities = 140/193 (73%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 42019 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 42078
|||| ||||| || |||||| || ||||| |||| || |||||||| || || || |
Sbjct 1642 CCTTCTGAATGTTATAATCACTAAGCGTCCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGA 1701
Query 42079 TGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 42138
| | || |||||||||| ||| | | |||||||||| |||||| |||| |
Sbjct 1702 TCAACCGTTGCTGGTCGGGTGGGATTCCCTCCTTGTCCTGGATTTTGCTCTTGACATTGT 1761
Query 42139 CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAA 42198
| | |||||||| || || || || | |||||||| ||||||||||| ||||| || |
Sbjct 1762 CGATGGTGTCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTTAGGGTCTTGACGA 1821
Query 42199 AGATTTGCATTTT 42211
|| | | | ||||
Sbjct 1822 AGCTGTTCGTTTT 1834
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543186535661120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |