Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq426 114 1e-20 seq1161 95.1 1e-14 >seq426 Length=8128 Score = 114 bits (126), Expect = 1e-20 Identities = 172/240 (72%), Gaps = 6/240 (3%) Strand=Plus/Plus Query 52601 GAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGT 52660 ||| || ||| ||||| || | || || ||||||| | | | ||||| || || Sbjct 5071 GAGGATCATCACTGAGGCCGTCACGATAGAGCAGGAGTTCCTCTCAGATGCGCTCCCAGT 5130 Query 52661 CGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCG 52720 || ||| || || |||||||| || |||||| | |||||||||||||| || || || Sbjct 5131 CGCGCTTCTCGGAATGAACGCCAAGCTCATGTGTCAATACATCGAGTTTGTCGCTGACCG 5190 Query 52721 TCTGTTGGT-GCAGCTCGGGCAGCCA--AAGTACTTCAACGCTCGCAATCCGTTTGAGTT 52777 || | || ||| | ||||| | | |||| || |||| | || || ||||| || Sbjct 5191 CCTCCTCGTTGCA--TTGGGCAACAAGAAAGT-CTACAACTCCACGAACCCATTTGACTT 5247 Query 52778 TATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 ||| ||||||| ||||| | |||||||||||||| || |||||||| || ||||| || Sbjct 5248 CATGGACAACATCTCGCTAGCTGGCAAGACCAACTTCTTTGAGAAGCGTGTTGGCGACTA 5307 >seq1161 Length=5408 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || ||||| | ||| |||||||| | | ||||||||| |||||||||||| Sbjct 3706 GCCACCCCGCAACCTCAACACTAAATGGAGAGTGCTCTCCTTTTGGATGTTGTAGTCGGA 3765 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || || || || || ||||| | | |||| || ||||| ||||| || || Sbjct 3766 GAGTGTCCGACCATCTTCCAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGGGG 3825 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGT-TTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 || ||||| || || ||| |||| | |||| | || | || |||| ||| | Sbjct 3826 AATCCCTTCCTTATC-CTGAATTTTACTCTTTACGTTGTCAATAGTATCGGAGCTCTCAA 3884 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | |||| || | ||||| || ||||| ||||| || ||||||||||| Sbjct 3885 CTTCGAGTGTGATGGTTTTGCCGGTCAGGGTTTTCACGAAAATCTGCAT 3933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496238405712960