Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq426 114 1e-20
seq1161 95.1 1e-14
>seq426
Length=8128
Score = 114 bits (126), Expect = 1e-20
Identities = 172/240 (72%), Gaps = 6/240 (3%)
Strand=Plus/Plus
Query 52601 GAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGT 52660
||| || ||| ||||| || | || || ||||||| | | | ||||| || ||
Sbjct 5071 GAGGATCATCACTGAGGCCGTCACGATAGAGCAGGAGTTCCTCTCAGATGCGCTCCCAGT 5130
Query 52661 CGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCG 52720
|| ||| || || |||||||| || |||||| | |||||||||||||| || || ||
Sbjct 5131 CGCGCTTCTCGGAATGAACGCCAAGCTCATGTGTCAATACATCGAGTTTGTCGCTGACCG 5190
Query 52721 TCTGTTGGT-GCAGCTCGGGCAGCCA--AAGTACTTCAACGCTCGCAATCCGTTTGAGTT 52777
|| | || ||| | ||||| | | |||| || |||| | || || ||||| ||
Sbjct 5191 CCTCCTCGTTGCA--TTGGGCAACAAGAAAGT-CTACAACTCCACGAACCCATTTGACTT 5247
Query 52778 TATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837
||| ||||||| ||||| | |||||||||||||| || |||||||| || ||||| ||
Sbjct 5248 CATGGACAACATCTCGCTAGCTGGCAAGACCAACTTCTTTGAGAAGCGTGTTGGCGACTA 5307
>seq1161
Length=5408
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
||| || ||||| | ||| |||||||| | | ||||||||| ||||||||||||
Sbjct 3706 GCCACCCCGCAACCTCAACACTAAATGGAGAGTGCTCTCCTTTTGGATGTTGTAGTCGGA 3765
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
| || || || || || || ||||| | | |||| || ||||| ||||| || ||
Sbjct 3766 GAGTGTCCGACCATCTTCCAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGGGG 3825
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGT-TTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565
|| ||||| || || ||| |||| | |||| | || | || |||| ||| |
Sbjct 3826 AATCCCTTCCTTATC-CTGAATTTTACTCTTTACGTTGTCAATAGTATCGGAGCTCTCAA 3884
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
| |||| || | ||||| || ||||| ||||| || |||||||||||
Sbjct 3885 CTTCGAGTGTGATGGTTTTGCCGGTCAGGGTTTTCACGAAAATCTGCAT 3933
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496238405712960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |