Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq1161 116 4e-21
seq426 109 5e-19
>seq1161
Length=5408
Score = 116 bits (128), Expect = 4e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || || | |||||| ||||| | || ||| ||||| || ||||| |||
Sbjct 3707 CCACCCCGCAACCTCAACACTAAATGGAGAGTGCTCTCCTTTTGGATGTTGTAGTCGGAG 3766
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || ||| ||| || ||||| || ||||| |||| | |||||||| || || ||
Sbjct 3767 AGTGTCCGACCATCTTCCAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGGGGA 3826
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| || ||||| ||| ||||| ||| | ||||| | | || || | ||||| ||
Sbjct 3827 ATCCCTTCCTTATCCTGAATTTTACTCTTTACGTTGT-CAATAGTATCGGAGCTCTCAAC 3885
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
||||| || | |||||||||||||| ||||| || |||||||||||
Sbjct 3886 TTCGAGTGTGATGGTTTTGCCGGTCAGGGTTTTCACGAAAATCTGCAT 3933
Score = 98.7 bits (108), Expect = 9e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| || || ||||| ||||| ||||| | || || ||| || || ||||||||
Sbjct 3965 GTGGATTCCTTTTGGATATTATAATCCGAAAGTGTCCGGCCATCCTCAAGTTGTTTTCCG 4024
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| |||| | ||| ||||| || || || || ||||| ||||| |||||| ||
Sbjct 4025 GCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACCCTCTTTGTCTTGGATTTTGCTTTTA 4084
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | || | ||| || | ||||||||||| | ||| | |||||||||||||| ||
Sbjct 4085 ACGTTATCAATGGTATCTGAGCTCTCGACTTCCAGGGTGATAGTTTTGCCGGTCAGTGTC 4144
Query 127097 TTTACAAAAATCTGCAT 127113
|| || || ||||||||
Sbjct 4145 TTAACGAAGATCTGCAT 4161
Score = 87.8 bits (96), Expect = 2e-12
Identities = 149/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945
|||||| || | || | || | ||| | || || || || |||||||| |||||
Sbjct 4162 TCCACCACGGAGACGAAGGACAAGATGGAGAGTCGATTCCTTCTGAATATTATAATCAGA 4221
Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005
|| ||||| ||| || ||||| ||||| || |||||| || |||||||| || ||
Sbjct 4222 CAAGGTGCGGCCATCTTCCAGCTGCTTTCCCGCAAAGATCAGACGTTGCTGATCTGGTGG 4281
Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065
||||||||||||||| |||||| ||| | | || | ||| || | | || ||
Sbjct 4282 GATGCCCTCCTTGTCCTGGATTTTACTCTTTACATTGTCAATGGTATCAGAAGATTCCAC 4341
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101
|| | || | || ||||| || |||||||| ||
Sbjct 4342 CTCCAATGTAATGGTCTTGCCAGTTAGAGTTTTGAC 4377
>seq426
Length=8128
Score = 109 bits (120), Expect = 5e-19
Identities = 162/227 (71%), Gaps = 6/227 (3%)
Strand=Plus/Plus
Query 47355 GAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGA 47414
|| |||||| | || ||| |||||| || | || || || || | | | | |||
Sbjct 5084 GAGGCCGTCACGATAGAGCAGGAGTTCCTCTCAGATGCGCTCCCAGTCGCGCTTCTCGGA 5143
Query 47415 ATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAG 47474
|||||||| || | ||| | | |||||||| |||||||| |||||||| |||||| |
Sbjct 5144 ATGAACGCCAAGCTCATGTGTCAATACATCGAGTTTGTCGCTGACCGCCTCCTCGTT--G 5201
Query 47475 CTAAAGTATCCCAAGA---TTTACCACACCGAGAATCCATTCGAGTTTATGAACAACATT 47531
| | | ||||| | ||| || || ||| ||||| || || ||| |||||||
Sbjct 5202 C-ATTGGGCAACAAGAAAGTCTACAACTCCACGAACCCATTTGACTTCATGGACAACATC 5260
Query 47532 TCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATA 47578
||||| | |||||||||||||| || |||||||| || ||||| ||
Sbjct 5261 TCGCTAGCTGGCAAGACCAACTTCTTTGAGAAGCGTGTTGGCGACTA 5307
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475477809536320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |