Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq1161 116 4e-21 seq426 109 5e-19 >seq1161 Length=5408 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || || | |||||| ||||| | || ||| ||||| || ||||| ||| Sbjct 3707 CCACCCCGCAACCTCAACACTAAATGGAGAGTGCTCTCCTTTTGGATGTTGTAGTCGGAG 3766 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| ||| || ||||| || ||||| |||| | |||||||| || || || Sbjct 3767 AGTGTCCGACCATCTTCCAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGGGGA 3826 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || ||||| ||| ||||| ||| | ||||| | | || || | ||||| || Sbjct 3827 ATCCCTTCCTTATCCTGAATTTTACTCTTTACGTTGT-CAATAGTATCGGAGCTCTCAAC 3885 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| || | |||||||||||||| ||||| || ||||||||||| Sbjct 3886 TTCGAGTGTGATGGTTTTGCCGGTCAGGGTTTTCACGAAAATCTGCAT 3933 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || || ||||| ||||| ||||| | || || ||| || || |||||||| Sbjct 3965 GTGGATTCCTTTTGGATATTATAATCCGAAAGTGTCCGGCCATCCTCAAGTTGTTTTCCG 4024 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | ||| ||||| || || || || ||||| ||||| |||||| || Sbjct 4025 GCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACCCTCTTTGTCTTGGATTTTGCTTTTA 4084 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | ||| || | ||||||||||| | ||| | |||||||||||||| || Sbjct 4085 ACGTTATCAATGGTATCTGAGCTCTCGACTTCCAGGGTGATAGTTTTGCCGGTCAGTGTC 4144 Query 127097 TTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 4145 TTAACGAAGATCTGCAT 4161 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| || | || | || | ||| | || || || || |||||||| ||||| Sbjct 4162 TCCACCACGGAGACGAAGGACAAGATGGAGAGTCGATTCCTTCTGAATATTATAATCAGA 4221 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 || ||||| ||| || ||||| ||||| || |||||| || |||||||| || || Sbjct 4222 CAAGGTGCGGCCATCTTCCAGCTGCTTTCCCGCAAAGATCAGACGTTGCTGATCTGGTGG 4281 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||||||||||||| |||||| ||| | | || | ||| || | | || || Sbjct 4282 GATGCCCTCCTTGTCCTGGATTTTACTCTTTACATTGTCAATGGTATCAGAAGATTCCAC 4341 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 || | || | || ||||| || |||||||| || Sbjct 4342 CTCCAATGTAATGGTCTTGCCAGTTAGAGTTTTGAC 4377 >seq426 Length=8128 Score = 109 bits (120), Expect = 5e-19 Identities = 162/227 (71%), Gaps = 6/227 (3%) Strand=Plus/Plus Query 47355 GAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGA 47414 || |||||| | || ||| |||||| || | || || || || | | | | ||| Sbjct 5084 GAGGCCGTCACGATAGAGCAGGAGTTCCTCTCAGATGCGCTCCCAGTCGCGCTTCTCGGA 5143 Query 47415 ATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAG 47474 |||||||| || | ||| | | |||||||| |||||||| |||||||| |||||| | Sbjct 5144 ATGAACGCCAAGCTCATGTGTCAATACATCGAGTTTGTCGCTGACCGCCTCCTCGTT--G 5201 Query 47475 CTAAAGTATCCCAAGA---TTTACCACACCGAGAATCCATTCGAGTTTATGAACAACATT 47531 | | | ||||| | ||| || || ||| ||||| || || ||| ||||||| Sbjct 5202 C-ATTGGGCAACAAGAAAGTCTACAACTCCACGAACCCATTTGACTTCATGGACAACATC 5260 Query 47532 TCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATA 47578 ||||| | |||||||||||||| || |||||||| || ||||| || Sbjct 5261 TCGCTAGCTGGCAAGACCAACTTCTTTGAGAAGCGTGTTGGCGACTA 5307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475477809536320