Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq1161 113 4e-20
seq295 87.8 2e-12
>seq1161
Length=5408
Score = 113 bits (124), Expect = 4e-20
Identities = 155/212 (73%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCGT 45189
|| || || || || ||||||||||||||||||||||| || || | | ||| |
Sbjct 3953 ACAAGGTGGAGTGTGGATTCCTTTTGGATATTATAATCC--GAAAGTGTCCGGCCATCCT 4010
Query 45190 CCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTT 45249
| | ||||||||| ||| | || | |||||||||||| || || || || ||||| ||||
Sbjct 4011 CAAGTTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACCCTCTTTGTCTT 4070
Query 45250 GAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTT 45308
| | |||| ||| | || | || | ||| || || ||||||||| || || | |||
Sbjct 4071 GGA-TTTTGCTTTTAACGTTATCAATGGTATCTGAGCTCTCGACTTCCAGGGTGATAGTT 4129
Query 45309 TTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|||||||| || || || || || || |||||
Sbjct 4130 TTGCCGGTCAGTGTCTTAACGAAGATCTGCAT 4161
Score = 109 bits (120), Expect = 5e-19
Identities = 168/236 (71%), Gaps = 4/236 (2%)
Strand=Plus/Plus
Query 45108 TTTATT--CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTAT 45165
|||||| || || || | ||||||||||| ||| || || ||||||||||| || |
Sbjct 3699 TTTATTGGCCACCCCGCAACCTCAACACTAAATGGAGAGTGCTCTCCTTTTGGATGTTGT 3758
Query 45166 AATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGT 45225
| ||| || || | ||| |||| || || || || | || | || |||||||
Sbjct 3759 AGTCGGAGAGTGTCCGACCATCTTCCAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGT 3818
Query 45226 CCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAA 45284
| || ||||| ||||| ||||| |||||||| || | || | || | || |||||
Sbjct 3819 CTGGGGGAATCCCTTCCTTATCCTGAATTTTACTCTTTA-CGTTGTCAATAGTATCGGAG 3877
Query 45285 GACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||| |||||||| || | ||||||||||| || ||||| || ||||| |||||
Sbjct 3878 CTCTCAACTTCGAGTGTGATGGTTTTGCCGGTCAGGGTTTTCACGAAAATCTGCAT 3933
Score = 89.7 bits (98), Expect = 5e-13
Identities = 153/220 (70%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
||||| || ||||| | | || ||||| || || |||||||| || |||||||||||
Sbjct 4160 ATTCCACCACGGAGACGAAGGACAAGATGGAGAGTCGATTCCTTCTGAATATTATAATCA 4219
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| ||| |||| || ||||| || | |||| |||||||| || ||
Sbjct 4220 GACAAGGTGCGGCCATCTTCCAGCTGCTTTCCCGCAAAGATCAGACGTTGCTGATCTGGT 4279
Query 45231 GGAATGCCTTCTTTATCTTGAATTTT--TTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288
|| ||||| || || || || ||||| | || || | || | ||| || ||||| |
Sbjct 4280 GGGATGCCCTCCTTGTCCTGGATTTTACTCTTTACATTG--TCAATGGTATCAGAAGATT 4337
Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTAC 45328
| || || | |||| || ||||| ||||||||||| ||
Sbjct 4338 CCACCTCCAATGTAATGGTCTTGCCAGTTAGAGTTTTGAC 4377
>seq295
Length=8791
Score = 87.8 bits (96), Expect = 2e-12
Identities = 111/153 (73%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 123606 GAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGC 123665
|| ||||| | |||| ||||| ||||||||||| ||||||| ||| | ||| || |
Sbjct 2073 GAGACCGGTAACCCGTTTATGCTTTACAAAGACGCGTGCAACAAGAAGAGCAACCAAAAG 2132
Query 123666 AACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATACAGCGATGCC 123725
|||||||| ||||| | | | ||| || ||| |||| || || ||||| || |
Sbjct 2133 AACTTGGGCACAATCAGAAGCTCTAACCTGTGCACCGAGATCATTGAATATTGCTCGCCA 2192
Query 123726 GATCAAGTGGCCGTGTGTAATTTGGCTTCGATT 123758
||| |||| || || || |||||||| || |||
Sbjct 2193 GATGAAGTAGCGGTTTGCAATTTGGCGTCTATT 2225
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451981345645280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |