Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq295 143 3e-29 seq426 107 2e-18 >seq295 Length=8791 Score = 143 bits (158), Expect = 3e-29 Identities = 413/630 (66%), Gaps = 8/630 (1%) Strand=Plus/Minus Query 116659 TACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCC-TCTGAGAGCCCTGGTGCCTT 116717 |||||| ||| || || ||||||||||| || | || | |||| | ||||| || | Sbjct 1933 TACTTTTCGTAAAGCGCATCAAACTCTTCGCC-ATAGACATCTGCCAAGCCTGGCGCTTC 1875 Query 116718 ATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGG 116777 || || || ||||||| ||| | ||| || |||||| ||||||||||| || || || Sbjct 1874 ATTGGGGCAAAAGAGAGTCCACTCGCCATTCTTCTCAACACGCTTCATGAACAGATCGGG 1815 Query 116778 GATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACG 116837 ||||||| || |||||||| || |||| ||||||| | || || || ||| Sbjct 1814 CGTCCAGAGAGCAAGAAAGAGATCTCGGGCGCGAACTTCTTCCTTACCATGGTTCTTACG 1755 Query 116838 CAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC 116897 | |||||||| || | |||||| | ||||||||| || || || | |||| | | | Sbjct 1754 GAGGTCCAAAAACTCAAAGATATCGGTGTGCCACGGCTCGAGATAAATAGCGAAAG-CTC 1696 Query 116898 CTTGCGAC----GACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCA 116953 || || | ||| |||| | ||||| || || || ||| || ||||| |||| Sbjct 1695 CTGGCCGCTTGTTACCTCCCTGATCGACATATCTAGCGGTATTGTTGAAAACGCGGAGCA 1636 Query 116954 TTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGA 117013 | |||| || |||| || ||||| || ||| ||| ||| | | | | Sbjct 1635 TGGGAACAATTCCATTTGAGGAACCATTCGTTCCCGCAATGTAAGAGCCAGTACCACGAA 1576 Query 117014 CATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGA 117073 ||| |||| | ||||||||| || || |||||| || || || | | Sbjct 1575 TGCGGTGAATGTTGAGACCAATACCACCAGCAGTCTTTGAAATCAAAGCACAAGTTTTCA 1516 Query 117074 GACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACA 117133 || |||| || || ||||| ||| |||| | ||||||| ||||| | || Sbjct 1515 ACGTGTCGTAAATACCCTCGATACTGTCTTCCTTCATATCGATGAGAAAGCAAGAAGCCA 1456 Query 117134 TTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTT 117193 | || || || |||||||| |||||||| || || | ||||| |||| | | Sbjct 1455 TCTGAGGTTGGGGGGTACCAGCATTGAAGAGTGTGGGAGAAGCGTGAGTGAAAAATTTCT 1396 Query 117194 GGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTG 117253 ||||||| || |||||||| | ||| | || ||||| ||||| || | | Sbjct 1395 GGGACATGAGATTATAGGTCTCGATGACTTTCTCTACATCATCCCCATGAATTCCAACAG 1336 Query 117254 AGACCCGCATAAACATGTATTG-GGGTGTT 117282 || ||||| | ||||| ||| ||| ||| Sbjct 1335 CAACACGCATGATCATGTGTTGCGGGCGTT 1306 >seq426 Length=8128 Score = 107 bits (118), Expect = 2e-18 Identities = 301/455 (66%), Gaps = 14/455 (3%) Strand=Plus/Minus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 |||||| || || |||||||| |||||||| ||||| ||| | || ||| || ||||| Sbjct 5308 GTAGTCGCCAACACGCTTCTCAAAGAAGTTGGTCTTGCCAGCTAGCGAGATGTTGTCCAT 5249 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACCCCAATCTGTTTGAGG 127345 || |||||||||||| | ||||| | | |||||| |||||| |||| Sbjct 5248 GAAGTCAAATGGGTTCGTGGAGTTGTAGACTTTCTTGTTG----CCCAAT-GCAACGAGG 5194 Query 127346 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG- 127404 || || || | ||| |||| ||||| | | |||| || | |||||| |||| || Sbjct 5193 AGGCGGTCAGCGACAAACTCGATGTATTGACACATGAGCTTGGCGTTCATTCCGAGAAGC 5134 Query 127405 GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGAT 127464 | || ||||||||| || ||| |||| ||| ||| || || || || | ||| Sbjct 5133 GCGAC-TGGGAGCGCATCTGAGAGGAACTCCTGCTCTATCGTGACGGCCTCAGTGATGAT 5075 Query 127465 GGCGTGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTTGAAGAGTTCCACA-GCAA 127523 | || || || || | | ||| | |||||| ||| || | Sbjct 5074 CCTCTCAACAGCCTCTGGGGTGGGGCGGTGGCGGAGGTGGGAGAAGAG-AAGACAGGCGA 5016 Query 127524 ACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCA 127583 | || ||| | ||||||||||| ||||| || || || || || || || |||| Sbjct 5015 AATCAGTGTGCAAGCCCTCGTCACGAGAGATAAGCTCGTTAGAAAATGTAAGCCCAGGCA 4956 Query 127584 TGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCT 127643 |||| || || ||||| | |||||| || | | ||| || ||| ||||||||| || | Sbjct 4955 TGAGGCCTCGTTTCTTGAGCCAGAAGATAGAAGCAAAAGATCCACTGAAGAAGATGCCTT 4896 Query 127644 CCACACACGCGAACGCAAATAGACGCTCGGCAAAG 127678 | ||| |||||| || | || |||| |||||| Sbjct 4895 CAACAGCCGCGAAGGCGACGAGGCGCTGTGCAAAG 4861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613477536926880