Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq1161 118 2e-21
seq602 102 2e-16
>seq1161
Length=5408
Score = 118 bits (130), Expect = 2e-21
Identities = 146/200 (73%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486
|||||||| ||||||||||| ||||||||| | | |||| |||||||||||||||
Sbjct 3731 TGGAGAGTGCTCTCCTTTTGGATGTTGTAGTCGGAGAGTGTCCGACCATCTTCCAGCTGC 3790
Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546
|| || || |||||||| ||||||||||| || ||| ||||| |||||||| ||
Sbjct 3791 TTACCAGCAAAGATGAGGCGCTGCTGGTCTGGGGGAATCCCTTCCTTATCCTGAATTTTA 3850
Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606
||| ||| || | || || | | || || || | ||||| || || || ||
Sbjct 3851 CTCTTTACGTTGTCAATAGTATCGGAGCTCTCAACTTCGAGTGTGATGGTTTTGCCGGTC 3910
Query 199607 AGAGTTTTCACAAAAATTTG 199626
|| |||||||| ||||| ||
Sbjct 3911 AGGGTTTTCACGAAAATCTG 3930
Score = 113 bits (124), Expect = 1e-19
Identities = 145/200 (73%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|||||||| ||||||||||| ||||| || | || || |||| ||| || | ||||||
Sbjct 4178 AGGACAAGATGGAGAGTCGATTCCTTCTGAATATTATAATCAGACAAGGTGCGGCCATCT 4237
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|||||||||||||| || ||||| ||||| ||||| || || || || || |||
Sbjct 4238 TCCAGCTGCTTTCCCGCAAAGATCAGACGTTGCTGATCTGGTGGGATGCCCTCCTTGTCC 4297
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| || || ||| || || | ||| || | | ||| || ||||| || || |||
Sbjct 4298 TGGATTTTACTCTTTACATTGTCAATGGTATCAGAAGATTCCACCTCCAATGTAATGGTC 4357
Query 199598 TTACCCGTGAGAGTTTTCAC 199617
|| || || |||||||| ||
Sbjct 4358 TTGCCAGTTAGAGTTTTGAC 4377
Score = 100 bits (110), Expect = 7e-16
Identities = 136/190 (72%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || | ||| ||||| |||||||| || | ||||| |||| | ||| | || |||
Sbjct 4486 AGAACCAAGTGAAGAGTAGACTCCTTCTGAATATTGTAATCAGAAAGAGTACGGCCGTCT 4545
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|||||||||||||| ||||| || ||||| |||||||| ||| || ||||| ||
Sbjct 4546 TCCAGCTGCTTTCCAGCGAAAATAAGACGTTGCTGGTCGGGAGGGATGCCTTCCTTGTCT 4605
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|||||||| ||| || | |||| || || || || || || | ||||| |||
Sbjct 4606 TGAATCTTAGACTTAACCGCGTCGATAGTATCACCTGACTCAACCTCGAGAGTGATGGTC 4665
Query 199598 TTACCCGTGA 199607
|| || ||||
Sbjct 4666 TTGCCGGTGA 4675
Score = 98.7 bits (108), Expect = 2e-15
Identities = 155/220 (70%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | |||||||||||||| || || |||||||||| || || || | | |||
Sbjct 3941 CGAAGACGGAGGACAAGGTGGAGTGTGGATTCCTTTTGGATATTATAATCCGAAAGTGTC 4000
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||| || || || ||||||||||||||||| || |||||||| || || ||
Sbjct 4001 CGGCCATCCTCAAGTTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACCC 4060
Query 199529 TCTCGCTCCTGAATCTTTTGC--TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCA 199586
||| || || | |||||| || ||| || | ||| |||| | || || ||||
Sbjct 4061 TCTTTGTCTTGGA--TTTTGCTTTTAACGTTATCAATGGTATCTGAGCTCTCGACTTCCA 4118
Query 199587 ACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| || || || || || || || || || || ||
Sbjct 4119 GGGTGATAGTTTTGCCGGTCAGTGTCTTAACGAAGATCTG 4158
>seq602
Length=25977
Score = 102 bits (112), Expect = 2e-16
Identities = 83/101 (82%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| ||||| || ||||||||||| |||| ||||||||||| | ||| | |||||
Sbjct 7937 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCC 7996
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518
|| |||||||| ||||||||||| || || |||||||| ||
Sbjct 7997 TCGAGCTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGG 8037
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178863174119156
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |