Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq1161 113 5e-20
seq602 102 9e-17
seq849 100 3e-16
>seq1161
Length=5408
Score = 113 bits (124), Expect = 5e-20
Identities = 170/238 (71%), Gaps = 8/238 (3%)
Strand=Plus/Plus
Query 46360 TTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTA 46419
||||| ||| || | || | |||||| | ||| | || |||||||||||||| |||||
Sbjct 3700 TTATTGGCCACCCCGCAACCTCAACACTAAATGGAGAGTGCTCTCCTTTTGGATGTTGTA 3759
Query 46420 GTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479
|||||| || || || | || || |||||||| || || || || | ||||||||||||
Sbjct 3760 GTCGGAGAGTGTCCGACCATCTTCCAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTC 3819
Query 46480 GGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GC 46535
| || | | ||||| ||| || || |||| | ||| | | | || || ||
Sbjct 3820 TGGGGGAATCCCTTCCTTATCCTGAATTTTACTCTTTA-CGTTGTCAATAGTATCGGAGC 3878
Query 46536 TCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || || || | |||||||||||||| ||||| ||||| || || || |||||
Sbjct 3879 TC---TCAACTTCGAGTGTGATGGTTTTGCCGGTCAGGGTTTTCACGAAAATCTGCAT 3933
>seq602
Length=25977
Score = 102 bits (112), Expect = 9e-17
Identities = 82/99 (83%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| |||||||| || |||||||| | || ||||||||||||||||||||
Sbjct 7957 CTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 8016
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500
|||| ||| |||||||||| || | | |||||||||
Sbjct 8017 GATCAGGCGTTGCTGGTCGGGGGGGATTCCCTCCTTGTC 8055
>seq849
Length=6452
Score = 100 bits (110), Expect = 3e-16
Identities = 138/193 (72%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463
|||| || || || || || || || || |||| || |||||||||||||| || |
Sbjct 1642 CCTTCTGAATGTTATAATCACTAAGCGTCCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGA 1701
Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523
|||| || |||||||||| || | | |||||||||| ||| || |||||| |
Sbjct 1702 TCAACCGTTGCTGGTCGGGTGGGATTCCCTCCTTGTCCTGGATTTTGCTCTTGACATTGT 1761
Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583
| | |||||||| || || || || | |||||||| |||||||| || || || || |
Sbjct 1762 CGATGGTGTCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTTAGGGTCTTGACGA 1821
Query 46584 AGATTTGCATTTT 46596
|| | | | ||||
Sbjct 1822 AGCTGTTCGTTTT 1834
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565211070723360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |