Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq1161 131 2e-25
seq426 120 3e-22
seq602 84.2 2e-11
>seq1161
Length=5408
Score = 131 bits (144), Expect = 2e-25
Identities = 172/232 (74%), Gaps = 6/232 (3%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| ||||| || || |||||||||||||| |||| || ||| | ||
Sbjct 3933 ATGCAGATTTTCGTGAAAACCCTGACCGGCAAAACCATCACACTCGAAGTTGAGAGCTCC 3874
Query 38304 GACAGCGTGCA-AACGCTTAAAGAA-AAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|| | | | |||| |||||| ||||| | || || || || |||||| | ||||
Sbjct 3873 GATACTATTGACAACG--TAAAGAGTAAAATTCAGGATAAGGAAGGGATTCCCCCAGACC 3816
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| ||||| ||||| | || || || |||||||| || | || || ||| ||||||||
Sbjct 3815 AGCAGCGCCTCATCTTTGCTGGTAAGCAGCTGGAAGATGGTCGGACACTCTCCGACTACA 3756
Query 38422 ACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472
||||||||||||| ||| || || ||||| ||| || | ||| | || ||||
Sbjct 3755 ACATCCAAAAGGAGAGC-ACTCTCCATTTAGTGTTGAGGTTGCGGGGTGGCC 3705
Score = 102 bits (112), Expect = 8e-17
Identities = 155/218 (71%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302
|||||| || ||||| || || || || |||||||| |||||| | || |||||| | |
Sbjct 4162 AATGCAGATCTTCGTTAAGACACTGACCGGCAAAACTATCACCCTGGAAGTCGAGAGCTC 4103
Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|| | | | | |||| | |||| |||| ||| ||||||||||| || || | ||||
Sbjct 4102 AGATACCATTGATAACGTTAAAAGCAAAA-TCCAAGACAAAGAGGGTATCCCACCAGACC 4044
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| || || ||||| | ||| || ||||| || || || | || || || || || |
Sbjct 4043 AGCAACGACTCATCTTCGCCGGAAAACAACTTGAGGATGGCCGGACACTTTCGGATTATA 3984
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
| |||||||||||| | || || || | || || |||
Sbjct 3983 ATATCCAAAAGGAATCCACACTCCACCTTGTCCTCCGT 3946
>seq426
Length=8128
Score = 120 bits (132), Expect = 3e-22
Identities = 192/275 (70%), Gaps = 3/275 (1%)
Strand=Plus/Minus
Query 133168 TAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAG 133227
|| |||||||| ||| || || | || ||||| | || ||||| ||| || |||
Sbjct 4686 TATGTGTCGATTAGGAGGGAGTAAGTCTCGGAGTGAATATTTTCCATCATGATCTGGAAG 4627
Query 133228 CCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTT 133287
|| || ||||| || ||||| ||||| ||||| |||||||||||||| ||
Sbjct 4626 CCATAGAAGCAGCGAGCCTCAGGTACCTGAACTTCACTGCTAAAACGCTCGACCAGGTTC 4567
Query 133288 TCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGC 133347
|||||||| ||||| || |||||||||||| |||| || || ||| |||| |||
Sbjct 4566 TCGTTGACAATGCCATCCGAGGCGGCGAAAAATGCCAAGACATGGGAGATAAAATATCGC 4507
Query 133348 TCGTTGTCGTTCAA---GCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCG 133404
|| | ||||||||| | | ||| ||| | || || || || || | || ||
Sbjct 4506 TCATCGTCGTTCAATCTGTTGTTCCAATCGTGAAGATCTTTCGAGAGATCAATTTCTTCT 4447
Query 133405 ACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
| ||||| || |||||||| ||||| || |||||
Sbjct 4446 GCAGTCCAGAATGACGCCTCCGCTTTCTTATACAT 4412
Score = 109 bits (120), Expect = 5e-19
Identities = 338/515 (66%), Gaps = 10/515 (2%)
Strand=Plus/Minus
Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650
|||||| || || || || ||||| || |||||||| || || || || || |
Sbjct 5326 CATCACACCGGCCTTCTGGTAGTCGCCAACACGCTTCTCAAAGAAGTTGGTCTTGCCAGC 5267
Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAG---TGCTTGGTGCC 132707
| || ||| ||| || || || ||||| | | ||||||| | |||| ||||
Sbjct 5266 TAGCGAGATGTTGTCCATGAAGTCAAATGGGTTCGTGGAGTTGTAGACTTTCTTGTTGCC 5207
Query 132708 GATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGC 132766
| | | | ||||| || | ||| || || |||||||||||||| ||||| | || ||
Sbjct 5206 CA--ATG-CAACGAGGAGGCGGTCAGCGACAAACTCGATGTATTGACACATGAGCTTGGC 5150
Query 132767 AATTAAGTCCCAGCAGACGC-ACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCG 132825
|| | ||| || || ||| || || ||||| || | ||| || ||||| || | |
Sbjct 5149 G-TTCATTCCGAGAAG-CGCGACTGGGAGCGCATCTGAGAGGAACTCCTGCTCTATCGTG 5092
Query 132826 ACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTG 132885
|| || || |||| ||| | ||| | | | | | || || || | || |
Sbjct 5091 ACGGCCTCAGTGATGATCCTCTCAACAGCCTCTGGGGTGGGGCGGTGGCGGAGGTGGGAG 5032
Query 132886 AACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTG 132945
|| | | || || || || |||||||||||||| | || || || |||||
Sbjct 5031 AAGAGAAGACAGGCGAAATCAGTGTGCAAGCCCTCGTCACGAGAGATAAGCTCGTTAGAA 4972
Query 132946 AAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCC 133005
|| || | || ||||||||||| ||||| |||||||| || || | || ||| ||
Sbjct 4971 AATGTAAGCCCAGGCATGAGGCCTCGTTTCTTGAGCCAGAAGATAGAAGCAAAAGATCCA 4912
Query 133006 GAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCT 133065
||||||| ||| || || |||||||| || || ||||||| | || | | ||||
Sbjct 4911 CTGAAGAAGATGCCTTCAACAGCCGCGAAGGCGACGAGGCGCTGTGCAAAGCTAGATTCT 4852
Query 133066 TTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTT 133100
|| | ||||| || | ||||| || |||||
Sbjct 4851 TTATCCTCAATCCACCGGATGGCCCAATCAGCCTT 4817
>seq602
Length=25977
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396
||||| |||||||| ||| ||||||| || || || || | ||| ||||| ||||| ||
Sbjct 8055 GACAAGGAGGGAATCCCCCCCGACCAGCAACGCCTGATCTTCGCCGGCAAGCAGCTCGAG 7996
Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456
|| | ||||| || |||||||||||||| ||||| |||| || || | || ||
Sbjct 7995 GATGGCCGCACTCTTTCTGACTACAACATCCAGAAGGAGTCGACCCTTCACCTCGTCCTA 7936
Query 38457 CGTTTGAGAGGCGG 38470
||| || | || ||
Sbjct 7935 CGTCTGCGCGGTGG 7922
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500148616645120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |