Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq1161 113 2e-19 >seq1161 Length=5408 Score = 113 bits (124), Expect = 2e-19 Identities = 148/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || |||||||| |||||||| || |||||||| || || || || || || Sbjct 4162 AATGCAGATCTTCGTTAAGACACTGACCGGCAAAACTATCACCCTGGAAGTCGAGAGCTC 4103 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 |||| |||||| ||||| ||||| ||||| || || || || || || || || Sbjct 4102 AGATACCATTGATAACGTTAAAAGCAAAATCCAAGACAAAGAGGGTATCCCACCAGACCA 4043 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||||| | || ||| | || ||||||||||| ||||| | || | |||||||||| Sbjct 4042 GCAACGACTCATCTTCGCCGGAAAACAACTTGAGGATGGCCGGACACTTTCGGATTATAA 3983 Query 391229 TATTGATAAGGATGCAACACTTCAC 391253 ||| | ||||| | ||||| ||| Sbjct 3982 TATCCAAAAGGAATCCACACTCCAC 3958 Score = 109 bits (120), Expect = 2e-18 Identities = 136/183 (74%), Gaps = 4/183 (2%) Strand=Plus/Minus Query 391060 TCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATTG 391119 |||| ||||| || ||||| || || ||||| | || || ||||| ||||||| ||||| Sbjct 4379 TCGTCAAAACTCTAACTGGCAAGACCATTACATTGGAGGTGGAATCTTCTGATACCATTG 4320 Query 391120 AAGCTAT-TAAACAA-AAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTT 391177 | | || |||| | ||||| || || ||||| || || || || ||||| |||||| | Sbjct 4319 A--CAATGTAAAGAGTAAAATCCAGGACAAGGAGGGCATCCCACCAGATCAGCAACGTCT 4262 Query 391178 AATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAA 391237 || || | || || || || |||||||| | || ||| | |||||||||||| | || Sbjct 4261 GATCTTTGCGGGAAAGCAGCTGGAAGATGGCCGCACCTTGTCTGATTATAATATTCAGAA 4202 Query 391238 GGA 391240 ||| Sbjct 4201 GGA 4199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975620485865744