Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq295 183 4e-41 seq702 125 8e-24 seq3837 100 3e-16 seq2517 100 3e-16 seq1215 98.7 1e-15 seq426 98.7 1e-15 seq3605 93.3 5e-14 >seq295 Length=8791 Score = 183 bits (202), Expect = 4e-41 Identities = 432/649 (67%), Gaps = 5/649 (1%) Strand=Plus/Minus Query 110577 GGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAAT 110636 ||| || ||||| | ||| | ||| || |||||| | |||||||||||| || || | Sbjct 1871 GGGGCAAAAGAGAGTCCACTCGCCATTCTTCTCAACACGCTTCATGAACAGATCGGGCGT 1812 Query 110637 CCACATCGCCGAGAAA-AGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTA 110695 ||| | | | ||||| || || ||| ||| | ||||| | ||| ||||| || | Sbjct 1811 CCAGAGAG-CAAGAAAGAGATCTCGGGCGCGAACTTCTTCCTTACCATGGTTCTTACGGA 1753 Query 110696 GCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCT 110755 | |||||||| || | |||||| | |||||| || |||||||| | ||||| | ||| Sbjct 1752 GGTCCAAAAACTCAAAGATATCGGTGTGCCACGGCTCGAGATAAATAGCGAAAGCTCCTG 1693 Query 110756 TACG---ACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAG 110812 || ||| |||| | ||||| | || || ||||| || | |||||| | Sbjct 1692 GCCGCTTGTTACCTCCCTGATCGACATATCTAGCGGTATTGTTGAAAACGCGGAGCATGG 1633 Query 110813 GAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGT 110872 ||| |||||||| || |||||| || ||| ||| || | | |||||||| Sbjct 1632 GAACAATTCCATTTGAGGAACCATTCGTTCCCGCAATGTAAGAGCCAGTACCACGAATGC 1573 Query 110873 CGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTG 110932 ||| || | | |||||||||||| || ||| ||| ||||| | | | | Sbjct 1572 GGTGAATGTTGAGACCAATACCACCAGCAGTCTTTGAAATCAAAGCACAAGTTTTCAACG 1513 Query 110933 TACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCT 110992 | | |||||||| || || ||| |||| | | || ||||||||||||| ||||| Sbjct 1512 TGTCGTAAATACCCTCGATACTGTCTTCCTTCATATCGATGAGAAAGCAAGAAGCCATCT 1453 Query 110993 GAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGG 111052 |||| | || || || |||||||||||||| || | || ||| |||| | |||| Sbjct 1452 GAGGTTGGGGGGTACCAGCATTGAAGAGTGTGGGAGAAGCGTGAGTGAAAAATTTCTGGG 1393 Query 111053 ACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAA 111112 |||| || || || |||| | |||||| | || ||||| |||| |||| Sbjct 1392 ACATGAGATTATAGGTCTCGATGACTTTCTCTACATCATCCCCATGAATTCCAACAGCAA 1333 Query 111113 CTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGCTGAAGGTAAC 111172 | ||||||| ||| | ||| || ||| | ||| |||| | || | || ||| Sbjct 1332 CACGCATGATCATGTGTTGCGGGCGTTCAGCAACCTTGCCATTGATTCGAAGCAGATAAG 1273 Query 111173 TCTTCTCTAGGGTCTTGAGACCAAAGTATCCAAAATCGAAATCACGATC 111221 | ||| ||||| |||| || |||||| | | |||||||||||| Sbjct 1272 ACCGCTCCAGGGTTTTGAATCCGAAGTATTGGTAGTTGAAATCACGATC 1224 >seq702 Length=25458 Score = 125 bits (138), Expect = 8e-24 Identities = 299/443 (67%), Gaps = 13/443 (3%) Strand=Plus/Plus Query 11506 TCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCGGCA 11565 || || || || || || | ||| || | ||||||||||||||| || || || | ||| Sbjct 6192 TCAAATCGGCCAGGCCGCAATAGCGCCTTATCAAGAATATCGACTCGATTCGTTCCAGCA 6251 Query 11566 ATGACTACAATGCCAGTCTC---ATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTG 11622 | || || | | || || | ||| ||| || ||||| || ||||||| || || Sbjct 6252 AGAACGACGA--CTTGT-TCGGAAGTGTTGAAGCCATCCATCTCGGTGAGAATTTGATTC 6308 Query 11623 ATCGTCTGTTCACGCTCATCGTTGGAG--GGCATAC-CACCTGCCGAACGCTTCTTACCG 11679 | || ||| ||||| ||||| | |||| | | ||| | | ||| || Sbjct 6309 AGTGTGCTTTCCCGCTCGTCGTTTCCACCGCCATAAGCGTTTTTCGATCTCGACTTTCCA 6368 Query 11680 ACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCGAAA 11739 | ||| ||||||||||| || |||| |||||| ||| ||| || || | |||| Sbjct 6369 ATAGCATCAATCTCATCAATAAATATGATACAAGGTGTGTTTTTCCGGGCAGTTGCGAAT 6428 Query 11740 AGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTG--CGGCAG 11797 || ||||| || || | ||||||||| || ||||| ||||| || | | | || Sbjct 6429 AGATCACGGACTCGGGAAGGTCCAACACCGACAAACATTTCAACAAACTCAGAACCGCTC 6488 Query 11798 AACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTAC 11857 | | ||| | ||| |||||| ||||| ||||| | || || || | || |||| Sbjct 6489 A-CGCTGTA-GAACGGAACACCTGACTCGCCAGCAGTAGCCTTTGCCAGTAATGTTTTAC 6546 Query 11858 CCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTTCCAAAGT 11917 | ||||| |||| || | ||| | |||||| || ||||||||||||||| || | Sbjct 6547 CGGTACCTGGTGGTCCTGAGAGGATGGCGCCTCGAGGGATCTTGGCACCAAGTCGTTGGA 6606 Query 11918 AGCGCTCAGGCTTCTTGAGGAAG 11940 | ||||||||||||| |||||| Sbjct 6607 ATTGCTCAGGCTTCTTCAGGAAG 6629 >seq3837 Length=11069 Score = 100 bits (110), Expect = 3e-16 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 136709 CGTTCTTATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGA 136768 || || ||||||||||||||||||||||||||||| |||||||||||||| || |||||| Sbjct 6763 CGGTCCTATAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGA 6822 Query 136769 GCCCCGTTGGGAACA 136783 || |||||||| || Sbjct 6823 CCCTCGTTGGGACCA 6837 >seq2517 Length=2139 Score = 100 bits (110), Expect = 3e-16 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 136706 CACCGTTCTTATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTT 136765 ||| | || ||||||||||||||||||||||||||||| |||||||||||||| || ||| Sbjct 350 CACAGGTCCTATAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTT 291 Query 136766 CGAGCCCCGTTGGGAACA 136783 ||| || |||||||| || Sbjct 290 CGACCCTCGTTGGGACCA 273 >seq1215 Length=5244 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 136712 TCTTATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCC 136771 || ||||||||||||||||||||||||||||| |||||||||||||| || |||||| || Sbjct 224 TCCTATAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCC 165 Query 136772 CCGTTGGGAACA 136783 |||||||| || Sbjct 164 TCGTTGGGACCA 153 >seq426 Length=8128 Score = 98.7 bits (108), Expect = 1e-15 Identities = 295/449 (66%), Gaps = 6/449 (1%) Strand=Plus/Minus Query 119208 TAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCATA 119267 ||||| || || | ||| || ||||| || ||||| ||| | || |||||||| ||||| Sbjct 5307 TAGTCGCCAACACGCTTCTCAAAGAAGTTGGTCTTGCCAGCTAGCGAGATGTTGTCCATG 5248 Query 119268 AAGTCAAAAGGATTTTTGGAGTTCCAGA-TTGGTGGTTGACCAACTTGTTTC-AGAAGAC 119325 |||||||| || || ||||||| ||| || | |||| |||| || | || || | Sbjct 5247 AAGTCAAATGGGTTCGTGGAGTTGTAGACTTTCTTGTTGCCCAA--TGCAACGAGGAGGC 5190 Query 119326 GATCGGAGACATACTCGATATATTCGGACATCTTTTCCGAATTCATACCTATGAGATTAC 119385 | || | |||| ||||||| |||| |||| | | ||||| || | || Sbjct 5189 GGTCAGCGACAAACTCGATGTATTGACACATGAGCTTGGCGTTCATTCCGAGAAGCGCGA 5130 Query 119386 ACGGGAGAGCATCGAGGATGAAGTTCTTCTCGATCTCCACAGCTTCTTTCACGATGGAGT 119445 ||||| ||||| || ||| | || ||| ||| || || || | | ||| | Sbjct 5129 CTGGGAGCGCATCTGAGAGGAACTCCTGCTCTATCGTGACGGCCTCAGTGATGATCCTCT 5070 Query 119446 GAATAGTTTCTGTCGATGGTTTGTTTCTCAAGAGTTTAAACAACTCTACGGCAAATTCTT 119505 || || |||| | || || | | | | || | ||| || || Sbjct 5069 CAACAGCCTCTGGGGTGGGGCGGTGGCGGAGGTGGGAGAAGAGAAGACAGGCGAAATCAG 5010 Query 119506 GATG-AAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGT 119564 || ||||||| | || |||||||| ||||| ||| || ||| ||||||||||| Sbjct 5009 TGTGCAAGCCCT-CGTCACGAGAGATAAGCTCGTTAGAAAATGTAAGCCCAGGCATGAGG 4951 Query 119565 CCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACA 119624 |||| |||||| ||||| ||||| | | |||| |||| ||||||||||| || ||| Sbjct 4950 CCTCGTTTCTTGAGCCAGAAGATAGAAGCAAAAGATCCACTGAAGAAGATGCCTTCAACA 4891 Query 119625 CAGGCGAAAGCGAATAGACGCTCAGCAAA 119653 ||||| |||| || |||| ||||| Sbjct 4890 GCCGCGAAGGCGACGAGGCGCTGTGCAAA 4862 >seq3605 Length=12885 Score = 93.3 bits (102), Expect = 5e-14 Identities = 215/324 (66%), Gaps = 0/324 (0%) Strand=Plus/Plus Query 11677 CCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCG 11736 |||| ||||| | || || ||||||| ||| ||| |||| || || || | | Sbjct 2017 CCGATCGCGTCCAATTCGTCAATGAATATGATCGCAGGTGCCTTGGTTCGGGCTTGATTG 2076 Query 11737 AAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCA 11796 || ||||| || || ||||| ||||| ||||| || | | |||| |||| | || || Sbjct 2077 AACAGTTCGCGAACGCGCTTGGCTCCTACACCAACATATACCTCATCGAATTCTGACCCA 2136 Query 11797 GAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTA 11856 || | || ||| || ||| || ||| ||||| | |||||||| || || || || Sbjct 2137 GACATGTAAAAGAAAGGTACACCAGCCTCTCCAGCCACAGCTCGAGCAAGTAGTGTTTTT 2196 Query 11857 CCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTTCCAAAG 11916 || |||||||| | ||| | || || |||| |||| ||| ||||| | Sbjct 2197 CCGGTACCAGGGGGTCCAACTAGGAGTACGCCTTTAGGGAGTTTGCCACCAAGCGTGTTG 2256 Query 11917 TAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAGTCG 11976 |||| ||||| || | | || || || | || | |||||||||||||| |||| Sbjct 2257 AAGCGTTCAGGGTTAGTCAAAAATTCAACCAGTTCTTGCAGTTCCTCCTTGGCCTCGTCG 2316 Query 11977 ATACCCTCAACATCGGTGAAACGA 12000 || | |||||| |||| ||| Sbjct 2317 CATCCATGAACATCACTGAACCGA 2340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588947523010400